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Domain assignment for gi|385806343|ref|YP_005842741.1| from Fervidicoccus fontis Kam940

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385806343|ref|YP_005842741.1|
Domain Number 1 Region: 626-1242
Classification Level Classification E-value
Superfamily Prokaryotic type I DNA topoisomerase 1.19e-132
Family Prokaryotic type I DNA topoisomerase 0.000000000678
Further Details:      
 
Domain Number 2 Region: 316-453,493-611
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.62e-33
Family Helicase-like "domain" of reverse gyrase 0.00038
Further Details:      
 
Domain Number 3 Region: 43-231,262-292
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.17e-21
Family Helicase-like "domain" of reverse gyrase 0.00064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|385806343|ref|YP_005842741.1|
Sequence length 1245
Comment reverse gyrase [Fervidicoccus fontis Kam940]
Sequence
MQQVKGIYIRSCPNCGGPVSDLRLSKGLACERCLPDINEELDFERLLLKLKEEGSLKELK
KYYNMEEMLKEFVDMFEKALRNPPWSAQITWAKRVFLNKSFSIVAPTGVGKTVFGMITAL
FFSKHKEKSMIVLPTRALVSQVCEKLERFKETLEIDAKILCSSMLRAGIKSEVLEMLSKG
DFDIFVCTSKFMIRNSSILKRAGFRFFFVDDVDSVLKSGKSIESLFNAMGFSSEAINLVL
EISRLRSLAMRAQEDNKSEKLRKELNEKLEKLKKEKEKIGAVLVVSSATGSPKGRKISLF
KELLGFQVGTKTEQLRNVVDTYKVVSDEDLEKELVSLVKKLGSGGLVFVPSDMGTEYAKK
IADLLNYIGIKSEAISSKNIRSIKSFETGEIDVLVGVSIYYGILVRGLDLPHRVRYVIFA
GLPRFKFTLQLENIHPLNVLTILSLLSKANIKDVSEQAKVYLKNIRRILRSLSPAAIQII
ANKLIEGKIENDIDRAFMESIQFLKNSLKREDVKNYLLSTNEVFVKKEGEKFFIYVPDIK
SYIQASGRCSRLYAGGLTKGLAITLVPKSENRLFEIFQRTARIYIESADIKPLEIIDLNQ
VLKEIDEDRKKVLKIIEGKFEGEKLDLVKSALMIVESPNKAKTISNFFGRPSVRILGENL
KAYEVSIGNLMLLITSSGGHIVDVVTNANDNELKAYSGLKKELYGILYDEKRKTFVPVYS
TIKKCLNCGNQFSDEIDRCPRCGSREIKDSRNVINALRDLATEVDKVLIATDPDTEGEKI
GWDISVLLRPFTQNIKRVLFHEVTRRAILKALSEEKLIDEKLVDAQITRRVEDRWIGFSL
SQKLQKDFWKEYCMKYVKNESRCSENKNLSAGRVQTPVLGWIIERYHDHLKSEKTIISIQ
AKNGGLIELSFAKEDYNRELDLDALKEKKVIVKVVKEEDAEVFPRPPFTTDTLLIESNKV
LGLSASRTMQLAQDLFEAGLITYHRTDSIRVSTTGIEVAKDYIQRNFVDSWEKLFTPRIW
GSEGAHEAIRPTRPLSKDDLIKLIDEGEIIVPKPLTRTHFSLYDLIFRRFVASQMKPCVV
SKQFIVYEIEGTGIKISEEILTNNIKDKGFLTVYSYLELRQRMKEGSYSIVNVNAIKKRV
IQLYTQADLVSKMKERGLGRPSTYATIISKILTRRYALESGKYRKIVPTKLGINVYNYLS
ANFSKLVSEERTRSLEEKMSRVANGEEDYRNVIEELYREISEISK
Download sequence
Identical sequences I0A2T2
gi|385806343|ref|YP_005842741.1|

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