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Domain assignment for Pavirv00003557m|PACid:23783902 from Panicum virgatum v202

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Pavirv00003557m|PACid:23783902
Domain Number 1 Region: 261-442,503-659
Classification Level Classification E-value
Superfamily L domain-like 3.66e-22
Family Rab geranylgeranyltransferase alpha-subunit, C-terminal domain 0.074
Further Details:      
 
Domain Number 2 Region: 13-183
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.23e-18
Family Type II thymidine kinase 0.087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Pavirv00003557m|PACid:23783902
Sequence length 778
Sequence
QVLPKDSMDLDADNNNLEADLKEYLTDKRYLIVIDGVQMDEWRAVNSAFVDSSTGSRVIL
TTTIQSVANVCSHGNGYVYQMDTLGEEDSKKVAFPGIRSPELEHGSAALLGKCDGLPLAL
VSVSDYLKSSVEPTGELCAKLCRNLGSHLKENHGHDSFSDLRKVLLDNYDSLAGYALSCF
LYLGIFPRNSPLKRKVVTRRWLAEGYARTESLRDEQDIADENFNKLVDWNIIRPIDTRNN
SQVKTCRTHGIMHEFVLHKSLSHRFIMTLSPDHPWAGANANNARHLSVQDGKLIECVASD
EELSRVRSLTVFGDAGGAISFVRKCKLIRVLDLEECSDLKDHDLKHICKLWHLKYLSLGG
TIHELPRCIDGLHCLETLDLRRTKIKSLPVEAIQLPHLTHLFGNKLMLDKDDLKNVNKMS
KLEKFLSGRKSNLQTLAGFVADDSKCLICSKKEDSKGFLQLTMNMYKLRKLKIWCKRVAN
RDSYMSDLSKTIQKLTKVPIDRRNDCSLSLDFEETDEAFPSQLNLEPCSEGSKYDLWSLK
LQGKLLMLPPFVMLLSGLTDLCISSATLTRGLLSALENLGKLLYLKLIADLLEGFEIKHG
AFPSLRRLCFQVQSCALAPPTIEQGALPNLVSLQLLCRDLVVGLSGMDIRHFKHLKEVTI
YAEATAQERQHWEHAAKKHPNRPRIMLVKTANQIESEELGLGPGPCAMREKRKRCPAEPS
LDDALDSSLKKMRLSESPSWSQAIVDPVMGADTMASSSIAIPLHADESGGWMQQHSRS
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Identical sequences Pavirv00003557m|PACid:23783902

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