SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pavirv00003894m|PACid:23822936 from Panicum virgatum v202

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pavirv00003894m|PACid:23822936
Domain Number 1 Region: 42-309
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.87e-50
Family Extended AAA-ATPase domain 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Pavirv00003894m|PACid:23822936
Sequence length 424
Sequence
MTVQNKSIEMRMESKDITGQHLFTDFLSTPSCTKTELIDTRKTSTDVVEEHIVGRKEEKA
KIITSLLESSSEKIILPIYGIGGIGKTTFSRLIKNDPKFKCYSKAWVHVSNRFDLNKIRQ
SIISELHKKESQAYDGQEIHNSLTKLHSGKKIMIVLDDLWEDDKFLLQDLTEMLHHDSKI
IILVTTRSESVAERIHTSLEPYKILPLTNGMCWDIIKQRSGFGARDDKEKLRGIGQEIAQ
KCAGVALAAQSLGFTLRGKSFDQWMEVKDNDIWREQVSKDISLPNHVLASLMLSYNYMDP
CLKLCFTYCAIFPKGHKIVQNDLIYQWISLGFIEPSTLRSTMELCRKYIVQLQGLSFFQV
SPKTPEHLYGKPTHWGGTHGECPRIGAACARSAQTSNGKFYHHTLRRNIENTLLKHQKHE
RVIF
Download sequence
Identical sequences Pavirv00003894m|PACid:23822936

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]