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Domain assignment for Pavirv00004495m|PACid:23775716 from Panicum virgatum v202

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Pavirv00004495m|PACid:23775716
Domain Number 1 Region: 136-414
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.6e-54
Family Atu3015-like 0.079
Further Details:      
 
Domain Number 2 Region: 470-623,693-865
Classification Level Classification E-value
Superfamily L domain-like 7.71e-28
Family Polygalacturonase inhibiting protein PGIP 0.058
Further Details:      
 
Domain Number 3 Region: 821-1053
Classification Level Classification E-value
Superfamily L domain-like 3.4e-19
Family Ngr ectodomain-like 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Pavirv00004495m|PACid:23775716
Sequence length 1072
Sequence
MSLSKAIGIISCINEFGNFFQLLGSAASYMGSKWNGPQEEKLKEDDVLQLQSDLQRLRDT
LPAMYNLIDRAEWKSHLKVKIEGNATQLSPFIDFFHSITQGSFNKVVEIQKRLSNLSSQL
EKMGLHEETPQFDKSLRPVTTSFRTEPKIFGREKELREVIRLLGVPNYSNQSSSKWKRSS
HATNCEPKIANVSVLPIVGIRGVGKTTLAQEITTLPRVKSHFDKIIWICVSDEFDEERFT
KVLIKSLSSKEATADNLDDLQKILAGEVEKKRFLLILDDIWPNALNEGCWRKYCALTNVL
HGSMLLVTTRFAEVADIVGTMDTFALEGLQNDDYQIDPKLEPIGKSILPKFKGAPLAAKT
IGRLLRKSLNPAHWNDILNSELWQLRQKETDILPALRLSYMHLPFNLKRCFSFCATYPKD
YNFDKSSLAEIWVAEGFVEAQGSIPLQHIGAQYFEDLVNLSFFQKLRGKYVIHDLMHDMA
QLVSKEDCFIVKNASDIEMVPQNVHHLSILRSNDVKLSNLLSLCKHKKLCNLLCNKSFGI
TLDHWFSGLQYLRVIFFASTKGLPESIGNLKHLRYLEISRHCDFYSFPSSFCSLYNLQIL
YARKCNFRRLPRGVCKLINLKKFEFEPDIPKMEIDAAEWGEHIRFIINNLNQITRDLTIY
NLGAISKDRAAESELKKKEYLNSLTLIWSWLRCLAHNETEVLQALQPPTNIKSVRIEGYP
GEYLPSCDNNNGGAGTILSLLTEVSITRCQNLSSLGIKPTTYAPAISKIYIAVCASVKSV
RIEWSPSLEEISVSNCPKMTHLSSPSAKKLKLYQIFGFNIDCSSLTLLHIYSYQLPSIEL
EKWSLPVLQRLHIDNCDCLKFIRESENISTGLSLGSLYSLSCRARGSTAKFPLLTELTIR
GCSKLESIDDLLTHECLHAIESIRIGCCDLLSLPTERFESFPFLKILLIGGCPRVYWQSS
MVLPPSLQELTLSSCGDFSAWSPRCCLENLTSLESLVMDSCKGIMSIPGDLWSSNLKSLR
KLKIVECPDLVSIGGPEAIANINTVYIQGCPKLMEIEQPRGNLWYCNDLAAK
Download sequence
Identical sequences Pavirv00004495m|PACid:23775716

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