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Domain assignment for Pavirv00013730m|PACid:23812134 from Panicum virgatum v202

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Pavirv00013730m|PACid:23812134
Domain Number 1 Region: 248-638
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.74e-101
Family Extended AAA-ATPase domain 0.000000000665
Further Details:      
 
Domain Number 2 Region: 639-947
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.03e-79
Family Extended AAA-ATPase domain 0.00000000678
Further Details:      
 
Domain Number 3 Region: 93-245
Classification Level Classification E-value
Superfamily Double Clp-N motif 3.79e-37
Family Double Clp-N motif 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Pavirv00013730m|PACid:23812134
Sequence length 978
Sequence
LARAARAAAAATARRQGPGAGREVLPRALAAPLAGDASAFAAATRRPAWFAAPLGRFPVG
AGLTVPPRRLFHSTAPAQYSAAGTSSSSQITPDEFTEMAWEGIVGAVDAARLSKQQIVES
EHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDDFISRQPKVVGDTSGPIIGSSFVSIL
DNAKKHKKEYGDEFVSVEHILQAFTSDKRFGQQLFKDLNIVENDLKEAISAVRGSQRVTD
QNPEGKYQALEKYGIDLTESARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVG
KTAIAEGLAQRIVRGDVPEPLMNRRLISLDMGALLAGAKFRGDFEERLKAVLKEVTASNG
QIILFIDEIHTVVGAGAVGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDAALER
RFQQVYCGEPAVEDTISILRGLRERYELHHGVKISDGALVAAAVLSDRYITGRFLPDKAI
DLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKERLSKLEAELESL
KQKQKNLSEHWEYEKSLMTRIKSIKEETDRVNLEIEAAEREYDLNRAAELKYGTLLSLQK
QLEEAENKLVEFQQSGKSMLREEVTDVDIAEIVSKWTGIPVSNLQQSEREKLLLLEDVLH
KRVIGQDIAVKSVANAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELGKTLAEFLFNTEN
ALIRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTESVRRRPYSVVLFDEIEKAHQDVF
NILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTTDSKEAVYEIMKKQV
IEMARQTFRPEFLNRIDEFIVFQPLDTSEINHIVEIQLNRVKSRLKQQKIHLQYTPEAVE
HLGSLGFDPNYGARPVKRVIQQMVENEIALGVLKGDFKEDDTVLVDVSSAAIAKGLAPQR
KLVLQRVENRNEELVAND
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Identical sequences Pavirv00013730m|PACid:23812134

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