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Domain assignment for Pavirv00019788m|PACid:23808065 from Panicum virgatum v202

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Pavirv00019788m|PACid:23808065
Domain Number 1 Region: 94-291
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.34e-33
Family ABC transporter ATPase domain-like 0.0032
Further Details:      
 
Domain Number 2 Region: 370-542
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.79e-33
Family ABC transporter ATPase domain-like 0.00089
Further Details:      
 
Domain Number 3 Region: 7-144
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 1.26e-17
Family Short-chain ferredoxins 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Pavirv00019788m|PACid:23808065
Sequence length 603
Sequence
MAQRLNRVAVVEEDRCKPKKCGQECKRNCPVVKIGKHCIEVGPKSKSALISEELCIGCGI
CVKKCPFGAITIINLPKDLDRDTTHRFGPNSFKLHRLTVPRPGQVLGLVGINGIGKSTAL
NILAGVIKPNLGRFNNPPDWHEVLAYFHGSELQNYFKCMVEDNLKPIMKPQVEIIHKNRN
SFRGIVGQLLDRKDERGMKDQLCNELQLSEIIDREVAKLSGGELQRVGIAAAALQSAEIY
MFDEPSSYLDVRQRLNAARVIMSLLRTNSYVIVVEHDLSVLDYMSDYVCCLYGKPGAYGV
VTLPFSVREGVNIFLAGFIPTENLRFRDESLTFKIADAQEDAEIKTYQQYKYPTMSKTIG
NFKLTVMEGEFTDSQIVVMLGENGTGKTTFIRMLAGVEKPDTLDGVDIEVPEFYVSYKPQ
KIELTYQGTVRQFLHEKIRDSYTHPQFVSDVMKPLKMEQLIDQEVQHLSCGQQQRVAICV
CLGKPADIYLIDEPSASLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIV
YEGQPAIDCTANSPQSLLSGMNKFLSHLDITFRRDPTNFRPRINKLESAKDREQKSVGSY
YYL
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Identical sequences Pavirv00019788m|PACid:23808065

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