SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pavirv00055091m|PACid:23804386 from Panicum virgatum v202

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pavirv00055091m|PACid:23804386
Domain Number 1 Region: 167-424
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.06e-61
Family Extended AAA-ATPase domain 0.000000266
Further Details:      
 
Domain Number 2 Region: 508-741
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.87e-61
Family Extended AAA-ATPase domain 0.000000236
Further Details:      
 
Domain Number 3 Region: 2-125
Classification Level Classification E-value
Superfamily Double Clp-N motif 0.0000000000275
Family Double Clp-N motif 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Pavirv00055091m|PACid:23804386
Sequence length 743
Sequence
MGDEAVAPHHLLLGLVAEDRSPAGFLGSGLRADRAREACRDALGKAGPAQAATGLATDVP
FSSPSKRVFEAAVEFSRNMSCNFISPEHIALGLFNLDDPTTNSVLKSLGADPSQLTKQAL
ARVQGELAKDGREPVGLSSFKLRDKSAAGAGKSAIVKYSNKKKDKSALAQFCVDLTMRAS
GGLIDPVIGRKEEIVRVVQIICRRTKNNPILLGEAGVGKTAIAEGLALKIANGDVPIFLV
GKRILSLDVALLMAGAKERGELEARITSLLREVRKAGDVILFIDEVHTLIGSGIAGRGSK
GAGLDIANLLKPALSRGELQCIASTTLDEHRLHFEKDKALARRFQPVFVNEPSQEEAVKI
LLGLREKYETYHKCKYTLEGINAAVYLSARYIPDRHLPDKAIDLIDEAGSRARMESFKKK
KEEQCSVLSKSPDEYWQEIRAVQSMHEVALTNRLKYSLDENDKEDIVNTKVIDEDKIASP
LTPPTSVDEPILVDSEEIARVTSLWSGIPVQKLTADEMKLLVGLDDELRKRVIGQDDAVV
AISKAVKRSRVGLNDPDRPIAMLLFCGPTGVGKTELTKALAASYFGSESAMVRLDMSEYM
ERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNVLLQVFEDGH
LTDSQGRRVSFKNTLIVMTSNVGSASISSGRRNIGFSTQKDTEDTTYAAMKSLVMEELKA
FFRPELLNRMDEVVVFRPLEKTQ
Download sequence
Identical sequences Pavirv00055091m|PACid:23804386

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]