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Domain assignment for Pavirv00060242m|PACid:23779225 from Panicum virgatum v202

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Pavirv00060242m|PACid:23779225
Domain Number 1 Region: 152-414
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.92e-61
Family RecA protein-like (ATPase-domain) 0.086
Further Details:      
 
Domain Number 2 Region: 479-863
Classification Level Classification E-value
Superfamily L domain-like 2.38e-38
Family Polygalacturonase inhibiting protein PGIP 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Pavirv00060242m|PACid:23779225
Sequence length 918
Sequence
MIAVSLSEKLAASLSASAALELSSLFAIRSGIAAAARVVDLLRTFLRAADSRRGTDALAA
AWINQVRDAAFELEDVADEYSYLSGRGFVRGCANLGAWFALSRRLRAARERLRELLVAKE
EYGILPDVSSAATSSAVGGSASVISRKVADAAHFLAEEEIVGFAAHRSLLMEWLTDDAEP
RRTLIAVWGMGGVGKTTLVPNVFKEVAASFYFDCSAWVPVSKNFTTEDLLRKVYKELKRD
VHAGAPPRNVEEMNYRSLVEALQGIMSKKRYLVLLDDVWDALAWYEIRSAFVDNGTGSRI
IITTRSQDVANLANSTRIILLKPLPEKEAWCLFCNTTFREMADRECPRHLEHWASKILDK
CSGLPLAIVSVGNLLALKEKSEFAWKNVHESLSSILNLSIDDLPYHLKRCFLYCSIYPED
FFVKRKILIRMWIAEGFVEEKNHATMEDVADDYLNQLAQRSLLQVVMKNEFGRAKRFQIH
DLIRELILSRSAKEGHFVFSKCTPTFESNSNYRHLVIDRCTRSDLPAPKMVSLRSLHGFK
TELDASLLSRFRLLTVVNLWYIPIAKLPTSVTNLFNLRYLGIRSTLIKELPHELGRLHKL
QTLDTKWSMVQRLPGSITKLKGLRHLILFRRDAADFRFMHPGKAVVLPNGMKNLTCLQTL
KYIEADENTVRSLGSLKQMRSLELSGVHEGNLIHLPSSISKMSHLLCLGIVSRNSDVQLD
LEPFSPPPLNLQKLTLTGRLIGGKLPSWFGHLSSLMKLQLHSSELKEDSIGLLSLLPRLF
DLSLVDAYEDKSLTFAAGVLPVLRNLRLEDLAYLAHLEFQKGSLLALEKLMLCQCSELIK
IPQGIENLMHLKNLELRDMPIELTEKLQERQESEGKYQDAWHTTIVKVIRTHNGWLLEKK
FNTNLCTLQGFKDGRSSI
Download sequence
Identical sequences Pavirv00060242m|PACid:23779225

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