SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Pavirv00060514m|PACid:23795137 from Panicum virgatum v202

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Pavirv00060514m|PACid:23795137
Domain Number 1 Region: 251-526
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.61e-78
Family Extended AAA-ATPase domain 0.0000000222
Further Details:      
 
Domain Number 2 Region: 92-232
Classification Level Classification E-value
Superfamily Double Clp-N motif 1.44e-31
Family Double Clp-N motif 0.0018
Further Details:      
 
Domain Number 3 Region: 583-691
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.4e-31
Family Extended AAA-ATPase domain 0.0000248
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Pavirv00060514m|PACid:23795137
Sequence length 694
Sequence
MEGSLVQSAIVPTVYKSNSGRFRVRARARTNATMVRNMPTRTLTLGSFQGLRQTNFLDTR
SVVKRDFGAIVASQIARPRGSATRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPNNIRTQVIRMVGESTEAVGA
GVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGE
PGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK
QNEDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPA
LERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDEALIAAAQLSYQYISDRFLPD
KAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQITKQKNEAVRGQDFEKAGELRDREMEL
KAQITAILDKSKEMIKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSDESDRLLKME
ETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYF
GSEEAMIRLDMSEFMERHTVSKLIGSPPGYREVP
Download sequence
Identical sequences Pavirv00060514m|PACid:23795137

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]