SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000000307 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000000307
Domain Number 1 Region: 6-302
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 2.51e-57
Family BAR domain 0.000000232
Further Details:      
 
Domain Number 2 Region: 278-373
Classification Level Classification E-value
Superfamily PH domain-like 4.78e-25
Family Pleckstrin-homology domain (PH domain) 0.0000117
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000000307   Gene: ENSLACG00000000276   Transcript: ENSLACT00000000309
Sequence length 484
Comment pep:known_by_projection scaffold:LatCha1:JH129610.1:1060:56182:-1 gene:ENSLACG00000000276 transcript:ENSLACT00000000309 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPAVDKLLLEEALQDSPQTRSLLSVFEEDAGTLTEYTNQLLQAMQRVYGAQNEMCLATQQ
LSNQLLAYEKQNFALGKGDEEVISTLQHFAKVVDELNALHTELTRQLADKMVLPIIQFRE
KDLTEISTLKDLFVLSSNEHDIAMAKYSRLPKKRENERLKAGVVAEVADSRRKQHLSSLQ
YYCSLNALQYRKRVAVIEPMLGYTEAQVNIFKKGMETFSKRMEDFLSSVSNMIQSIQRQL
DEETEAMRLSQQELLSGNDSVYFPDYDVASPQINRNLIQKAGYLNIRNKTGLVTTSWDRH
YFFTQGGNLMCQPRGAVAGGLILDLDNCSVMAVDCEDRRYCFQITSPTGKSVIILQAESK
KEYEEWICAINNISRQIYLTDNPEAVAIRLNQTAMQAVTPVTSFEKKHDSLRPDSNRTKN
ADLVHTENITQRSLNAPDDVALIEPGTPIQFDIVLPATEFLDQNRAGGGRYNTHSLNASN
TTVL
Download sequence
Identical sequences H2ZSD6
ENSLACP00000000307 ENSLACP00000000307

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]