SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000002054 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000002054
Domain Number 1 Region: 252-366
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 1.26e-22
Family PWWP domain 0.0072
Further Details:      
 
Domain Number 2 Region: 106-223
Classification Level Classification E-value
Superfamily Bromodomain 0.0000000000000034
Family Bromodomain 0.0026
Further Details:      
 
Domain Number 3 Region: 59-124
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000432
Family PHD domain 0.014
Further Details:      
 
Domain Number 4 Region: 530-573
Classification Level Classification E-value
Superfamily HIT/MYND zinc finger-like 0.000000106
Family MYND zinc finger 0.013
Further Details:      
 
Weak hits

Sequence:  ENSLACP00000002054
Domain Number - Region: 433-500
Classification Level Classification E-value
Superfamily Heat shock protein 70kD (HSP70), C-terminal subdomain 0.0341
Family Heat shock protein 70kD (HSP70), C-terminal subdomain 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000002054   Gene: ENSLACG00000001835   Transcript: ENSLACT00000002068
Sequence length 575
Comment pep:known_by_projection scaffold:LatCha1:JH129294.1:126104:219841:1 gene:ENSLACG00000001835 transcript:ENSLACT00000002068 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EREIASLNRCTRYMTRVHGMHPKDTNRQLGLAVKDGLIVETLTVGCKGSKAGIEQEGYWL
PGDEIDWESETHDWYCFECHLPGEVLMCDSCFRVYHPKCLSDDFRVRDSITHWQCPVCRS
FKKKSMGKPELSTYLRFIVYRMKERAIDLNKKGKDSKHPMFRRLVHSPIDVSSVQERVNE
GKYRSYEEFKADAQLFLHNTVIFYGADSDQAEVARILYKDTCHEVGIGLCHICVLLSIHP
PPQWAIYPLIPSHELVWAKMKGFGSWPAKVMQKDDNQVDVRFFGHHHQRAWIPSENIQDI
TVNIHQLQVKRSMGWKKACDELQLHQRFLREGRFWKSKTEDRREEEAESSISSTSNEQLK
VTQEPKTKKSRRNQHVEPKKEELEPETEAVSSSQEIPTTVPQQPEKVSVSTQTKKPSAST
PRMLHRSTQTSTDGVCQNMCHEKYNKIFNDFKDRMKADHKRETERLVREALEKLRAEVEE
EKRQAVNKAVSNMQAEMDRKCKQVKEKCKEEFMEEIKKVASQHKQLISQTKKKQWCYNCE
EEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRRKR
Download sequence
Identical sequences H2ZXD3
ENSLACP00000002054

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]