SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000006801 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000006801
Domain Number 1 Region: 1005-1096,1142-1347
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 3.3e-47
Family Type II Proline 3-hydroxylase (proline oxidase) 0.08
Further Details:      
 
Domain Number 2 Region: 110-333
Classification Level Classification E-value
Superfamily TPR-like 1.1e-23
Family Tetratricopeptide repeat (TPR) 0.014
Further Details:      
 
Domain Number 3 Region: 316-378
Classification Level Classification E-value
Superfamily TPR-like 0.0000000171
Family Tetratricopeptide repeat (TPR) 0.019
Further Details:      
 
Weak hits

Sequence:  ENSLACP00000006801
Domain Number - Region: 74-126
Classification Level Classification E-value
Superfamily TPR-like 0.0102
Family Tetratricopeptide repeat (TPR) 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000006801   Gene: ENSLACG00000006035   Transcript: ENSLACT00000006859
Sequence length 1452
Comment pep:known_by_projection scaffold:LatCha1:JH127252.1:197774:445704:-1 gene:ENSLACG00000006035 transcript:ENSLACT00000006859 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKSCGVSLAAAAAASAALGDEEKKMAAGKASETEEDFPSLTAQERENLSGTDSRLFGFLR
LHEDGARTKALLLKAVRCYESLILKAEGKVEPELFCQLGHFNLLLEDYPKALSAYQRYYS
LQPDYWKNAAFLYGLGLVYFHYNAFQWAIKALQEVLYIDPSFSRAKEIHLRLGLMFKVNT
DYESSLKHFQLALIDSNSCTLSKTEIQFHIAHLYEIQRKYHTAKQAYEQLLQTENLPAQI
KATVLQQLGWMHHTVDQLGDKSTKENYAIQCLQKSLEADPNSGQSWYFLGRCYSSIGKVQ
DAFISYRHSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTL
YESCNQPQDAIKCYLNAARSKNCTNTSALTTRIKFLQAQLCNLPQGSLQNKTKLLPSIEE
AWSLPIPAELTSRQGAMNSAQQACKPHQQSNELVIGLSQTQTQQQSLPLQMVPSSQADDL
SPAKRKRTSSPTKNTPEAWGSGHAVPHHTVTQQVPSWYLTPQKLQLLEQLRANRSNLTQV
QKQMLEQLEGQFVLMQQHQQQMRQTAVTQVRHSGVPNGPTVDSSLPTNSVSGQQPQVALT
RVPTVTQPGIRPACPGQPMANGPFPVGPVPCSTAGMLGNTDTMGNNHVTGSGSNGNVPYL
QRNALSLPHNRTNLTSSTEESWKKQLANSTQGLHKGQSSHLAGPNGERPPSSTGPSQHLQ
TAGTGIQNQVGHPAMPSNSLTQGAALNHLSSHTATSGGQQGITLTKESKPSGNASSVPEV
NRHSRGTPNSTASVEGLPNHVHQVTADAVSSPSHGESKSPGVLSSDNPQLSALLMGKANN
NVGSGTCDKVNNIHPAVDIKTENSVASSPSSAISTATPSPKSTEQTTTNSVTSLNSPHCG
LGHTVNGKGLEDSQSPMKTDPPLISHKPSPQLMPSTSLSIYPSSVEVLKACRNLGKNGLS
NNSILLDKCPPPRLPLPPEPSLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTV
IRGLAGALKLDLGLFSTKTLVEANGEHIVEVRTQLLQPADENWDPTGTKKIWRCESSRSH
TTIAKYAQYQASSFQESLREENEKKSHHKDHSDSESASSESCGRRRKGPFKTIKFGTNID
LSDEKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQEN
NNFCSVNINIGPGDCEWFVVPEPYWGIMNDFCERNNINFLMGSWWPNLEDLYEADVPVYR
FIQRPGDLVWINAGTIHWVQAIGWCNNIAWNVGPLTAYQYKLAVERYEWNKLQSVKSIVP
MMHLSWNMARNIKVSDHKLFEMIKYCLLRTLKQCQMLKEALINAGKELVWHGRAKDEPAH
YCSICEVEVFDLLFVTNESNSRKTYVVHCQDCARKASANLENFVVLEQYKMEDLMQVYDQ
FTLAPPLPSSSS
Download sequence
Identical sequences H3AAY0
XP_006001390.1.90931 ENSLACP00000006801 ENSLACP00000006801

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]