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Domain assignment for ENSLACP00000008799 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLACP00000008799
Domain Number 1 Region: 333-362,454-566
Classification Level Classification E-value
Superfamily TIMP-like 4.71e-26
Family Netrin-like domain (NTR/C345C module) 0.047
Further Details:      
 
Domain Number 2 Region: 242-296
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000307
Family Laminin-type module 0.041
Further Details:      
 
Domain Number 3 Region: 363-404
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000837
Family Laminin-type module 0.016
Further Details:      
 
Weak hits

Sequence:  ENSLACP00000008799
Domain Number - Region: 54-131
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000238
Family Galactose-binding domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000008799   Gene: ENSLACG00000007774   Transcript: ENSLACT00000008868
Sequence length 567
Comment pep:known_by_projection scaffold:LatCha1:JH128768.1:298227:308219:-1 gene:ENSLACG00000007774 transcript:ENSLACT00000008868 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PCYHGDSKRPHYCIPDFLNAALGREVQVSSVCGAEPEKYCRLSRRKGRGVCRVCDSSRPA
AAHPASYLTDHHDASNRTCWQSETGVQFPQNVTLTLSLGGKFEVSHISLRFCSQPPESLA
IYKSMDAGRTWVPFQFYSGQCRKMYGQPRKRLIPKLLEHEAICSRLPRGGRELRNGGLLT
FLPLQGRPSAPSFEYSPVLQDWITATDIRVAFHRLHATDSRGLGAETLAFYAVADFRVGG
RCKCNGHASHCHQGDGSSGMSCVCEHHTAGAECNVCKAFYQDRPWQRATPDEPHECVAAC
NCNLHSTRCRFNMELFQLSGRKSGGICLNCRHNTAGRHCHYCKEGYTRDASKPTSHRRAC
RRCQCHRIGAIDTFCNETSGQCRCKDGVVGLTCNRCAAGYRQSQSAVSPCKQLLIVTPPP
NPPRSGSEPVGSECGSYCKPNRGEIRMDFRDYCKKDYVLHMRPIAMEKSGPWWKFTVVVV
SVFRQQGPRIRRGEQSLWVPDQDLSCHCPWLQLGGAGYLLIGDRGASPDRSQLVADRTSL
ALPWREVWAQKLRRFQQGERRGDCNET
Download sequence
Identical sequences H3AGM8
ENSLACP00000008799 ENSLACP00000008799

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