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Domain assignment for ENSLACP00000012921 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLACP00000012921
Domain Number 1 Region: 513-613
Classification Level Classification E-value
Superfamily TIMP-like 1.67e-21
Family Tissue inhibitor of metalloproteinases, TIMP 0.075
Further Details:      
 
Domain Number 2 Region: 305-370
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000153
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 3 Region: 240-307
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000186
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 4 Region: 368-424
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000725
Family Laminin-type module 0.009
Further Details:      
 
Domain Number 5 Region: 57-137
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00000454
Family APC10-like 0.078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000012921   Gene: ENSLACG00000011379   Transcript: ENSLACT00000013016
Sequence length 614
Comment pep:novel scaffold:LatCha1:JH126903.1:595948:629956:-1 gene:ENSLACG00000011379 transcript:ENSLACT00000013016 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RCDDRSCNPPVGNLATGRTVSTVTTCGQNGTELHCSHSGPSLYDPLKVDCGHPVCAKCNA
NRAEHSHLPAAMTDDFFTNPGSWWQSAQGVHREEIRLDLETEFYLTHVILLFKSPRPAAM
FIERSQDNGQTWRPYKYFAASCMETFGIPDDVTQEGSLCTSRYSRAVPCTKGEVIFRALT
PANKIEDPYSPEAQDLLKLTNLRLLLLKRQECPCQSVGLLEKPQRFAHYAIYDLIVRGSC
FCNGHAEDCQPFTGTKSSETKVYGKCVCRHNTAGDHCERCAAFYNDQPWRPGDGKTGTPH
ACRKCQCHDHASRCHFDVSVWLAAGRRTGGVCDDCKHNTEGRRCHRCKAGFYRDRSKPLS
ATDVCKPCSCHPVGSSNATFNRSWKCNPKTGYCYCKPGVAGPHCDRCMMGYWGFGENGCR
PCDCSRECEQHTGACLESYDQERFFNIPIGGSIPDLLHIPSNESREEWNWEDEQGFSALR
HAGCPNGGSCIEGVRVPPYQVHKHTHIFFIYILIKARILSAHDKGTHAEVIVKVKKVLKM
GKVKITRNTLSIYPESWTNRGCTCPILNPGTDYLIAGHVDPRSRKLLVNMNSLVKPWKAS
LGKQVSDILRSGCR
Download sequence
Identical sequences H3ATF0
ENSLACP00000012921 ENSLACP00000012921

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