SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000014138 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000014138
Domain Number 1 Region: 218-305
Classification Level Classification E-value
Superfamily SH2 domain 3.47e-46
Family SH2 domain 0.00000636
Further Details:      
 
Domain Number 2 Region: 312-388
Classification Level Classification E-value
Superfamily RING/U-box 3.33e-40
Family RING finger domain, C3HC4 0.0000253
Further Details:      
 
Domain Number 3 Region: 5-130
Classification Level Classification E-value
Superfamily N-terminal domain of cbl (N-cbl) 7.72e-40
Family N-terminal domain of cbl (N-cbl) 0.00000968
Further Details:      
 
Domain Number 4 Region: 132-217
Classification Level Classification E-value
Superfamily EF-hand 4.22e-34
Family EF-hand modules in multidomain proteins 0.0000396
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000014138   Gene: ENSLACG00000012446   Transcript: ENSLACT00000014237
Sequence length 515
Comment pep:known_by_projection scaffold:LatCha1:JH127065.1:717801:738119:1 gene:ENSLACG00000012446 transcript:ENSLACT00000014237 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FCSAVDKKLAEKASRLLEKLVCLCQQPKMQLKNSPPYLLELVPETYQHFHLVLGNYELRS
EALWENEYFRVYVENLYSKVKQTTRLFKTAAIYWKENVRENMRNLTKLSLIFSHMLAEVK
ALFPRGVYEGATYRVTKVEAADFWNRAFGNESIVRWDVFSKQLKMIHSFDVGLEAMALKS
TIDLTCNDHISVFEFDIFTRLFQPWKTLLKNWNMLAVTHPGYTAFLTYDEVKERLQMYSK
KPGSYIFRLSCTRMGQWAIGYVTADGSILQTIPHSKPLFLALIEGFKEGFYLYPDGRNIN
PDLTSLVEPSRQDHIMVSQEQYELYCEMGSTFQLCKICTENDKDVKIEPCGHLMCSLCLT
SWLESDGHTCPFCRCEIKGTETIVVDPFDPTNESSTISKTAQTSSAAIQPPASMLPLVPP
RLDLNQYRNTGLAQASSPNTSPKVKQMELVHLTPLYPEAVGSNPSTVSQTSSEYDNREER
PSNEDSGVRHSQVNSDSSHPVQSPPANPARRSTGH
Download sequence
Identical sequences H3AWW7
ENSLACP00000014138 ENSLACP00000014138

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]