SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000020174 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSLACP00000020174
Domain Number - Region: 140-310
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 0.0239
Family gamma-Butyrobetaine hydroxylase 0.09
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000020174   Gene: ENSLACG00000017731   Transcript: ENSLACT00000020314
Sequence length 350
Comment pep:known_by_projection scaffold:LatCha1:JH126594.1:2333611:2345165:-1 gene:ENSLACG00000017731 transcript:ENSLACT00000020314 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ASACKKQFYVCGCFYTNNIFLEDYKIHVTFLNEQQFRRDYGPVLRNAGCTTEEKFKDVFA
KIEKELQRRQLLDQHSMERKAIISETYEPIHPHVYMLQESFLAPKFVEVVNYCQSEDADL
KGLLDRIDSLPAKKVYSFPVFTKEFCQDLVEGLTFFLLLNLKKKKNNLFKNGKIQLNELG
FDETFITPLRENYLQPITSLLFPDYGGKCLDSHKVFVVKYALHEDLSLSYHYDNAEVTLN
VSLGKQFTEGNLYFGDVRQVPISETECVEVEHQVTQGLLHQGGQLHGALPIKSGERWNLI
VWMRSSAVRNRLCPMCNMQPHLVEAIGFGDGYTKDTAEEIPDNVDVCTLI
Download sequence
Identical sequences H3BE53
ENSLACP00000020174

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]