SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000022486 from Latimeria chalumnae 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000022486
Domain Number 1 Region: 337-448
Classification Level Classification E-value
Superfamily SH2 domain 8.08e-32
Family SH2 domain 0.00000527
Further Details:      
 
Domain Number 2 Region: 19-111
Classification Level Classification E-value
Superfamily Ubiquitin-like 3.79e-28
Family Ras-binding domain, RBD 0.00036
Further Details:      
 
Domain Number 3 Region: 142-255
Classification Level Classification E-value
Superfamily PH domain-like 2.03e-17
Family Pleckstrin-homology domain (PH domain) 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000022486   Gene: ENSLACG00000005554   Transcript: ENSLACT00000025207
Sequence length 451
Comment pep:known_by_projection scaffold:LatCha1:JH129003.1:173152:286815:-1 gene:ENSLACG00000005554 transcript:ENSLACT00000025207 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSLYARRVTLPVITPIVLQKRVIKVYSEDDTSKALEVPNDIIAQDVCQLFVLKNHYIDDH
CWTLLEHLPLIGLERIIEDHELVIEVQSRWGMETDSRLYFRKNYAKYEFFKNPLQFFPEH
MVSVSSETNGIIMHSQLIQTFLNSSTCPEVHGYLYAKEQGKKSWKKIYFVLRRSGLYFST
KGTSKEPRHLQFFSEFSDGEVYMLITGKKMYGAPSSYGFCIKPNKSGGARDLKLFCADDE
ESRTCWVTAIRLFKYGVQLYQNYISPHQSRSISSQNASPMRSVSENSLVAMDFSGHKGRV
IENPTEALSVAVEEGLAWRRKSCLRLNAHGSPTASQSTAPNIAIHRSQPWFHHKITREEA
QRLIAQQGLIDGVFLLRDSQSNPKAFVLSLSHGQKIKHIQIVTLEENGELFFTLDDGHTR
FTDLIQLVEFYQLNKGVLPCKLKHHCGRITL
Download sequence
Identical sequences M3XID0
ENSLACP00000022486

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]