SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000001999 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000001999
Domain Number 1 Region: 404-452
Classification Level Classification E-value
Superfamily p53-like transcription factors 7.46e-17
Family Rel/Dorsal transcription factors, DNA-binding domain 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000001999   Gene: ENSLACG00000001788   Transcript: ENSLACT00000002013
Sequence length 455
Comment pep:novel scaffold:LatCha1:JH127276.1:30135:56551:-1 gene:ENSLACG00000001788 transcript:ENSLACT00000002013 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTSSEEPEFDFDFLFEYNPGEDSNSRGASNVYNCPTSSIATSLPFNGGNTSLPSQCHSIT
SSSPIISVLQPSNHLHGYGGVADTGTGGYYLTPGIRPNGAPALESPRIEITPYIGLHHGT
NQYLPEPEIEEAPNSKRLNSIVTLTLPNADLYRDPSCLSPASSLSSRSCNSEASSYESGY
SYPSPQTSPWQSPCVSPKGTATEDGYHRGIAACTLMNSPRHSPSTSPRTSITDENWLTAR
NSRPPSPCGKRKYSLNGGHYRQPSYSPHHSPTPSPQTSPRVSVTEETWIDSTNQYTNSAI
VAAINALTTDTTIDMSDCIPIKSRKTAVDHNSSMALKTEPVGEDHGIISSTVDLSPEDFP
GSRLPFKKENFGDQYLSVPQHPYSWTKQKTLSPTSYISQSLPALDWQLPSHSGPYELRIE
VQPKSHHRAHYETEGSRGAVKASAGGHPIVQVLML
Download sequence
Identical sequences H2ZX78
ENSLACP00000001999 ENSLACP00000001999

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]