SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000003642 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000003642
Domain Number 1 Region: 231-402
Classification Level Classification E-value
Superfamily p53-like transcription factors 1.86e-58
Family Rel/Dorsal transcription factors, DNA-binding domain 0.0000000363
Further Details:      
 
Domain Number 2 Region: 401-518
Classification Level Classification E-value
Superfamily E set domains 2.18e-31
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.00000381
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000003642   Gene: ENSLACG00000003245   Transcript: ENSLACT00000003675
Sequence length 1531
Comment pep:novel scaffold:LatCha1:JH129075.1:75291:189741:1 gene:ENSLACG00000003245 transcript:ENSLACT00000003675 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSQKSGGEVGPPLPASVPADASPSSSSSVGGVCSSLTTTSSPIMHSSTSVTDNVAMQVES
CTAEQRVSSQGVSEMLAYENQLTNKAAQQLQSTPKRRTVLNISPPPEDLLDDSRMSCQDE
GCGADSEQSCNMWMDESTSNFSLMSSSSYNDNTEVPRKSRKRSPKQRPGIKQQECKEASM
DIFDADSARGPHYVLSQLVSEGKGSSKTGNGTADGHKGQVVKKSPTLCGQYPTKAEGKEL
KILVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHG
FYQACKVTGRNTTPCKEVDIEGTTVIEVSLDPNSNMTLAVDCVGILKLRNADVEARIGIA
GSKKKSTRARLVFRVSIPRSDGSILTLQTPSFPILCTQPAGVPEILKKSLHNCSVKGEEE
MFLIGKNFLKGTKVIFQENVSDESSWKAEAEIDMELFHQNHLIVKVPPYHNQHITSPVSV
GIYVVTNAGRSHEVQPFSYTPEPATASDINVKQETPSPVQTCSFEEAMKAAAMKATGCNL
DETNLLPSALVAPLLASPVVKREEVSTMEVACNQVSSAVFKTPDAMGPTQQQTLELANTI
SPGTTFSASASHPQDETEKHKPIQSSMYSNAEPLATIQTQDISQPSSFQSPSSTSPQPAT
KFQNSENMLESGEIQPREVLQSAGPVVTLSQLTEPSHTQQQQAQSLQQQISSSIFSSEDS
TSLQNALHQLQAGNFQPSNTSGSNGNASLVQQVLEAQHLSSVLFSGSSTNESIQQQMDKI
QEQMNAEMFQQGNAVPNDVNSGLFSSPEAGIHNRAEKMMSGRPENVITGTENSVSNQQQQ
QQQSLESPANMVMAMAAAVAATGQMQSDLFPPPVTGTLSGNIQQSAVFQQGSHVMTGLQT
TKEHQLQVQCGLFASGAPIAGSENAGTASQPTVTTGTNIFQPSINVVETEGASAQAKQMQ
AEVFQAMVQMQHNGETQPQVNLFSPTESMIQVQTGRPQQQDGGLFQQNRDVISVQPGNFL
QQPSQSPPQLFHTQASLNEAQNMSQDPQRGLFQSQNPVVQKATPSQDQVQSPLFHSPNSV
TVLQSSPISQEQQTANIFLSQNSIAPLQNNQVSQEKQQISFFAPQSTVTTEQQNMFSQQA
QISQMQNAILSQKQQQQDGLFQSQVALSSLPPTTLAQTQQVVLFQPQHSVVALQSSTSSQ
QQLQQQQQQMQQQQLQQQQQQIQQQQQQQMQQQQQQMQQQQQLQLQQQQLQQQQQQLQQQ
QNLLFGSQNTISTMGGNVTSSEQPQNILFNPSPPLATSMTTQEQQNSSLFHPQPNMIPIN
QEQPQSLQFQSQTTVGSLQNAGSPQTEQQPSAMYHSPPQMQLVQNPGSSSEQQVALFMTT
AAMSALQKSINQQELQQPSMFNTPSNVAGLQGNTSSPSPPQQSGLFHASAGGTINQLQNP
PPPAQQTSGMFLFGIQNDCGELITSGSSSLSDQLIAISEAGQTQSEVQNTVSSLLSQQMP
DSQLTSNQNMEKINDLLVSLQNQGNNITNSF
Download sequence
Identical sequences H3A1X1
ENSLACP00000003642 ENSLACP00000003642 XP_014353145.1.90931

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]