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Domain assignment for ENSLACP00000005140 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLACP00000005140
Domain Number 1 Region: 223-337
Classification Level Classification E-value
Superfamily Acid proteases 7.13e-27
Family Retroviral protease (retropepsin) 0.021
Further Details:      
 
Domain Number 2 Region: 4-81
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000000000000265
Family Ubiquitin-related 0.00011
Further Details:      
 
Weak hits

Sequence:  ENSLACP00000005140
Domain Number - Region: 987-1045
Classification Level Classification E-value
Superfamily UBA-like 0.000539
Family UBA domain 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000005140   Gene: ENSLACG00000004569   Transcript: ENSLACT00000005186
Sequence length 1052
Comment pep:novel scaffold:LatCha1:JH127591.1:128423:158301:-1 gene:ENSLACG00000004569 transcript:ENSLACT00000005186 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLVTVYCVRRDLSEITFSLEVDADFELQNFKALCEMESGIPAAESQIVYAETPLTDSRRS
LASYGLRDGDVVILRQLERSQSQSQFPGLPLIDFSSIAVPGPSNSQQQLQPPPPQQRQPR
PTSSSSTSSPQGLDNPGLLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFTKVLQEQQ
QERARRERERLRLIAADPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVVMLYIN
CKVNGHPVKAFVDSGAQMTIMSQACADRCNIMRLVDRRWEGIAKGVGTQKIIGRVHLAQV
QIEGDFLPCSFSILEDQPMDMLLGLDMLKRHQCSIDLKKNVLVIGTTGTQTQFLPEGELP
ECARLAYGQPRDDLRPDEIADRELAEALQKSADEADKEDKTTTSLEPPLLPTPREIKRPI
YPTGEDSHAAQPQSQEMDSSITTPPSLSSQKSFLKGEVKPQSMESLQMPGEKVHTGLEDL
SLPPSTANDSLTSQVDFNNEHMYTGEPFHSQNPFNELISSETSNAAETTIGFDTNRGQKE
DTSVQHEITGSAHQTKILLNSTSHHSEHLEFSPVGEISSNLQPQEELGNETIVCEKREPS
THELSPGNVPIWESPVGMELQENIEMSIANNLLSNDKTSQLQEMALRSCAENSIPASAAS
AASEATKAVMEINLCKSPINMSCDVEVEAEIQENANGASLNQEESLMEVDVEASKCVLPL
SDEIGQAENSGNGTGTSIQNLDKAESASPCSPMEEQSSLPDPYQNKSTDSSSIEEPCLSL
AAALMELHQLLVASHKESSRTLFPNRDDSCQLISAPKEQDQLIEPSDQCAQNAPSTETPC
SIGKLSDGLAVLLGDSNTCDLTPCVNETNVEPRDESSQQAAQEKAQEITGVQSEGTPVSL
KIGGTADLQKPMQQVESSETSSVVPDLKNSTNEMLVKDFEVASDAAVNSNLIPVGESPEK
EVLLHSNSSSTSEALMAQSGPTEPLADRPPSASLLEPGSAAVPPAQFPVADINRIMRSGF
TMQEAAEALEQFHGNADLALLTLLARKIVVPT
Download sequence
Identical sequences H3A669
ENSLACP00000005140 ENSLACP00000005140 XP_006004330.1.90931

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