SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000018119 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000018119
Domain Number 1 Region: 107-298
Classification Level Classification E-value
Superfamily p53-like transcription factors 6.96e-74
Family T-box 0.000000986
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000018119   Gene: ENSLACG00000015964   Transcript: ENSLACT00000018251
Sequence length 568
Comment pep:novel scaffold:LatCha1:JH126797.1:1413120:1462124:-1 gene:ENSLACG00000015964 transcript:ENSLACT00000018251 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAEKRRSPCALSLKAHAFSVEALIGVEKKRKLDGNCEKKFLEVIEVASPSENVPSSESNS
EREKSSETDCSGGSPSCEEVRLGRVSPAAGLPPPLPAQCASAPGDEVRVELQGADLWKRF
HEIGTEMIITKAGRRMFPAMRVKIAGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAG
NADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHIILHSMHKYQPRVHA
IRKECGDDLSPVKPVPSGEGVKAFSFPETVFTTVTAYQNQQITRLKIDRNPFAKGFRDSG
RNRMGLEALVESYAFWRPSLRTLTFEDIPGITKQGSISSASLLQGSGSGVPSTHPHLLPG
SPCSSPAFHLGPHNNQLCNLSPADYAACNRSGLALNRYGNSLVETYSRLTSPSSETFTPP
RTPSYTTMSMSMTANDGDSFNCSQTGLAMQISGMSPPQLQYIMPTPPSNAFTSNQNHQSS
YNAFRLHSPYGIYGYNFSTSPRLATSPEKIVSSQGSFLGSSPSGTMTDRQMLSPVESVHM
FSNAPQNLFDSRTLGTIAPSSQVSAHMV
Download sequence
Identical sequences H3B898
ENSLACP00000018119 XP_005995114.1.90931 ENSLACP00000018119

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]