SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000022643 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000022643
Domain Number 1 Region: 129-320
Classification Level Classification E-value
Superfamily p53-like transcription factors 7.04e-86
Family p53 DNA-binding domain-like 0.000000656
Further Details:      
 
Domain Number 2 Region: 501-565
Classification Level Classification E-value
Superfamily SAM/Pointed domain 6.63e-18
Family SAM (sterile alpha motif) domain 0.0000463
Further Details:      
 
Domain Number 3 Region: 353-393
Classification Level Classification E-value
Superfamily p53 tetramerization domain 0.000000000157
Family p53 tetramerization domain 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000022643   Gene: ENSLACG00000014214   Transcript: ENSLACT00000025973
Sequence length 637
Comment pep:novel scaffold:LatCha1:JH126687.1:902850:1064733:1 gene:ENSLACG00000014214 transcript:ENSLACT00000025973 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSQNSETSNILTPDVSSDVLQHLLDKFQPMCSELPIELRFTEGPCGSAPTNSIEISMDYF
RMHDSDITDPMWPQYTNLGILNSMDQQLPNGSSSTSPYNTEHAQNTVTAPSPYAQPSSTF
DALSPSPAIPSNTDYPGPHSFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVM
TPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNEGQVAPPSHLIRVEGNSHSQYV
EDHITGRQSVLVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIVTLESRDGQVLG
RRCFEARICACPGRDRKADEDSIRKQQVSEDAKNGDGTKRPFRQTPQGIQIKKRRSTDDE
VLYIAVRGRENYEVLQKVRESLELAQFLPQHVIEHYRQQQQHLVQKQPSMQSQPSYGSAS
PPLNKMANMNKLPSVSQLINPQHRNALTPNTIQEGMSANIPQLVSTHMPMPSDLNGLTPT
QALPPPLTMQSATHCTPPPPYPSDCSISSFLARVGCSSCLEYFTTQGLTTIYQIEHFSMD
DLVGLKIPEQFRNAIWKGLLDHRQVPDYCSPPHLLRTNSGASTVSVGSNETREERVIDAV
RFTLRHTISFPPRDEWNDFNFDIDARRNKQRIKEEGE
Download sequence
Identical sequences M3XIT7
ENSLACP00000022643 ENSLACP00000022643

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]