SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000002989 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000002989
Domain Number 1 Region: 286-399
Classification Level Classification E-value
Superfamily PH domain-like 4.2e-17
Family Pleckstrin-homology domain (PH domain) 0.012
Further Details:      
 
Weak hits

Sequence:  ENSLACP00000002989
Domain Number - Region: 6-64
Classification Level Classification E-value
Superfamily HR1 repeat 0.0131
Family HR1 repeat 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000002989   Gene: ENSLACG00000002674   Transcript: ENSLACT00000003015
Sequence length 602
Comment pep:novel scaffold:LatCha1:JH129906.1:55965:98471:-1 gene:ENSLACG00000002674 transcript:ENSLACT00000003015 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QNCTVRNKDSDIQKKIDYEIRMRDGTCKLLAACTQREQALEAAKGLLTCNARIMAYMSEL
QKMKEAQVMQRASRRPSDVGPTSDRQPCKGKVAISXLAFPCSIIVLPTELFSSFSYPHRC
AVFCLLRVGAEIHDTEMVLVDRTLTDICFESGIVFGEAGPDFEMRVEIYSCCVEEDFCSS
NTPKKLASKLSSSLGRSSGKKVRAALEGSGGSPVSNGGSSPILLPAPTVIGPKYHLLAHM
MLTLTNVQDSFRTHDLTILGNEDCSFWLPLYGSLCCRLAAQPNCMTQRMMSGFLNLQQLS
GDQQNWKKMYCVLRGTNLFCYRSLEEAEGSVEPAFTIAVNKETSVRAAEKDAKNRVHGMS
ITNRYGGEEVTHTLMAENQEQKQRWMEAFWQHFFDMSQWKQCCDDLMKIEMPSPRKPPAL
LSKQGSLYHEMIIDSPDDIATVTDILARRMQELETRRDMDSPPWLSLFEGPQEPAICRNL
LTMSDASITSDSDSAYSASPCMYRAQKTGPSDQGAPRIRPRTLSLDAKLTSLKSQAQNAE
ASEAAPRKHVVLFSASSSGSNSSGSTTPDSETGYFSRPAPGRQSLRNIRTKLDPRNWLQT
QV
Download sequence
Identical sequences H3A018
ENSLACP00000002989 ENSLACP00000002989

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]