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Domain assignment for ENSLACP00000011998 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLACP00000011998
Domain Number 1 Region: 127-382
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 4.98e-69
Family Nuclear receptor ligand-binding domain 0.00000762
Further Details:      
 
Domain Number 2 Region: 59-139
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.14e-30
Family Nuclear receptor 0.0000808
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000011998   Gene: ENSLACG00000010560   Transcript: ENSLACT00000012089
Sequence length 396
Comment pep:novel scaffold:LatCha1:JH126664.1:514301:546890:1 gene:ENSLACG00000010560 transcript:ENSLACT00000012089 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAMVVNVWQEDIPGASGSQARSQPQMCTQEAGGTPQTPGTPAGSTPGQEALSGDRAPAVD
CMVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRGNRDCPIDQHHRNQCQYCRLKK
CLKVGMRREAVQRGRMTHPQTSPGQYTLTNSDQYNGHSYLTGFISMLLRAEPYPMSRYGG
QCMQPNNFMGIENICELAARLLFSAIEWAKSIPFFPDLQLGDQVSLLRMTWSELFVLNAA
QCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRVFQEQVEKLKALHVDSAEYSCLKAI
VLFTPDAVGVSDLAHVESIQEKSQCALEEYVRNQYPNQPSRFGRLLLRLPSLRIVSSPII
EQLFFVRLVGKTPIETLIRDMLLSGSSLNWPYMAMQ
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Identical sequences H3AQS7
ENSLACP00000011998 ENSLACP00000011998 XP_005991702.1.90931

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