SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSLACP00000016271 from Latimeria chalumnae 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSLACP00000016271
Domain Number 1 Region: 64-330
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 3.71e-41
Family PhyH-like 0.079
Further Details:      
 
Domain Number 2 Region: 961-1018
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 9.03e-21
Family Tudor domain 0.00027
Further Details:      
 
Domain Number 3 Region: 1019-1074
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.0000000000000572
Family Tudor domain 0.00018
Further Details:      
 
Domain Number 4 Region: 797-834
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000598
Family PHD domain 0.029
Further Details:      
 
Weak hits

Sequence:  ENSLACP00000016271
Domain Number - Region: 886-929
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00216
Family PHD domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLACP00000016271   Gene: ENSLACG00000014335   Transcript: ENSLACT00000016385
Sequence length 1136
Comment pep:novel scaffold:LatCha1:JH126742.1:1005585:1207295:1 gene:ENSLACG00000014335 transcript:ENSLACT00000016385 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSENPSPQNPSCKIMTFRPTMEEFRDFRKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANGEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDNDVEEWNIGNLNTLLDMVEQECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILRKYSIPFDRITQEAGEFMITFPYGYHAGFNHGYNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPDRYDLWKQGKDNTVVDHMKPTALTSPELDIWNE
RKSELKAKLIRSSLPLKTNHWVATFKYRSPPFKKKKKDKSTALGSHRKRTQPRRLKTQDQ
KSLDEAVAMVTGLDEVKVKEEHKRVTDTDEEDKNKTPESTEGNDDEGKRSAVRNLKKNKK
KKTSQNSLSLTAQPKKFFESAEGKVKPRPSKLKGDMGAVPSSGGNSPIAATLSTVSSETP
AASVASASEEEEFKPRPIIPMLYVVPRSKKVVFDKERMSCQQAFEQFATRKARAWREQVA
VTTAPPQESTVKAEENKATEAPETSTETVDTQPSSLYSKMKMEIKKSRRHPLGKPPTRSP
LSVVKQEASSDEEAFPFPSEEDVSDTEALKSLLNHLWQNKAHNFLAERKFNAAAALTEPY
CAICTLFYPYGQNLAKAVQPDKEVPQSSTSAELNPLTLHPKSGQKTKPLIPEMCFTSSGE
NMEPLPSNSYIGEDGTSLLISCAKCCLQVHASCYGIRPDLVKDGWTCSRCTTNAWTVDCC
LCNLRGGALQMTTDRRWVHVVCAIAVPEVRFVNVIERNPVDISAVPEQRWKLKCIYCRKR
MKIVSGACIQCSYEHCSTSFHATCAHAAGVAMEPDDWPYVVSITCFKHRAASQNQNQVLK
DVSLGQAVITKNRNGLYYRCKVIGSATQTFYEVNFEDGSYSDNLYPENIISRDCIQQGPP
SEGEVIQLRWTDGNIYSAKFNAAHLSHMYQVEFEDGSQLTVKRGEIYTLDEDLPKRVKSR
LSLTTGAPTEDAYSGDEGKTAKRPRVNSRLPEDYHNNPDYLAFMESLMQFQQGAQT
Download sequence
Identical sequences H3B301
ENSLACP00000016271 ENSLACP00000016272

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]