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  Home > Genomes > Loa loa v3.3 > LOAG_00505T0

Domain assignment for LOAG_00505T0 from Loa loa v3.3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  LOAG_00505T0
Domain Number 1 Region: 122-239
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 2.88e-33
Family Calponin-homology domain, CH-domain 0.0000297
Further Details:      
 
Domain Number 2 Region: 1542-1712
Classification Level Classification E-value
Superfamily Plakin repeat 1.06e-26
Family Plakin repeat 0.0037
Further Details:      
 
Domain Number 3 Region: 2925-3026,3067-3151
Classification Level Classification E-value
Superfamily Plakin repeat 4.8e-25
Family Plakin repeat 0.0068
Further Details:      
 
Domain Number 4 Region: 1743-1918
Classification Level Classification E-value
Superfamily Plakin repeat 4.19e-23
Family Plakin repeat 0.0078
Further Details:      
 
Domain Number 5 Region: 2797-2959
Classification Level Classification E-value
Superfamily Plakin repeat 1.57e-21
Family Plakin repeat 0.0031
Further Details:      
 
Domain Number 6 Region: 2499-2654
Classification Level Classification E-value
Superfamily Plakin repeat 3.23e-18
Family Plakin repeat 0.0054
Further Details:      
 
Domain Number 7 Region: 245-357
Classification Level Classification E-value
Superfamily Spectrin repeat 3.4e-18
Family Spectrin repeat 0.0023
Further Details:      
 
Domain Number 8 Region: 643-764
Classification Level Classification E-value
Superfamily Spectrin repeat 2.77e-16
Family Spectrin repeat 0.0084
Further Details:      
 
Domain Number 9 Region: 1943-2125
Classification Level Classification E-value
Superfamily Plakin repeat 6.89e-16
Family Plakin repeat 0.0057
Further Details:      
 
Domain Number 10 Region: 2095-2152,2204-2292
Classification Level Classification E-value
Superfamily Plakin repeat 0.000000000000068
Family Plakin repeat 0.0084
Further Details:      
 
Domain Number 11 Region: 1121-1236,1269-1294
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000166
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 12 Region: 3305-3365
Classification Level Classification E-value
Superfamily Plakin repeat 0.00000000549
Family Plakin repeat 0.0032
Further Details:      
 
Domain Number 13 Region: 2365-2446
Classification Level Classification E-value
Superfamily Plakin repeat 0.00000000968
Family Plakin repeat 0.023
Further Details:      
 
Domain Number 14 Region: 495-587
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000209
Family Spectrin repeat 0.0065
Further Details:      
 
Domain Number 15 Region: 891-1041
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000054
Family Spectrin repeat 0.0047
Further Details:      
 
Weak hits

Sequence:  LOAG_00505T0
Domain Number - Region: 1055-1150
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0125
Family Spectrin repeat 0.017
Further Details:      
 
Domain Number - Region: 335-460
Classification Level Classification E-value
Superfamily Spectrin repeat 0.023
Family Spectrin repeat 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) LOAG_00505T0
Sequence length 3436
Comment | LOAG_00505 | Loa loa V3 hypothetical protein (3437 aa)
Sequence 
MYKVLRSYSKKAERKHELTRSTGNTAEKINGYSAADGTASSTIHSLSPSYGGGGGTIMED
VRNGQVVPIDRNGRIEPAWPSGQAFSESSSYEAREHFERKVQRVKKTRGERDSNRKSKKS
KVSEVLSSIDGVSARDALLQWAQDVTRGYPGVNVRNFTSSWRDGLAFNAILHRYRPNIIQ
WNKIIGESVSARDRLNNAFAAAESEFGVSRLLDAEDVDVDVPDEKSIITYVSSLYNALPH
TSELSKYEDVMYEYEREAAEWLHWIERATRLMDDRQLPTNLGELRRLEHDLERFKSEDLP
PKAREKQRLADHYAELHQLFERTEHLHIPTELSTQSLDRSWQRLLRSLNERFSLIEEQAG
VQGSTTDIISRLARGIGITNEKLDYILNRIEDAESRIDTSRPVDLQRLIDGIIDDLVALE
ASISSFFEDVDQLKRLRHPEANDYYQQVYGLEQRRQAYLSRLRTQFVTRLGIRTEQLMRE
NEQRRESIRRTTYGRVEDCIQWVRSRLEKLSEMEFVEDLEQLESMFEEHKVDNHEIQDFR
QNVDECIARQAEISAEDTHEYCELLSILESEYQQLRDLSAGRMLDLDTLIAFIRGAQHEI
VWISEREDIEISRNWSDIKQLDLPMLQNYYKQLLHEIELRETRFNDVHNKGAALLNQGHP
AIHVIEFYLNAMQRKWDWLLALSKCLEQHLRDALNLNSFMEDANAAEEWMIKHSEMLRRK
YNKSEFSLEEGEQMLRELDEISELIKKYHSILMTLTERSSQISPLWQRGERIQRPISVVA
LADYTNKDITIREGDECMLTDNSDLIHWNVNGPGGTEVLVPSVVFRILPPDARITTYLNR
LHGSLEKLRRLWGQKHRMVRYNMVLNTMAQIRNWNLSTFVSMTPEERDAIIKALNDDAHK
LFSELEQNDPLAMRLKEELKLTNEHFYDLLNQMNRPKEPEVGAQFDAKIAELLGKLDKAY
RNLNDRVMQNIPRSREELEKLTTGHKDFEDGLQALDVDVSTVNELFRQIPEPTPSQRASF
DHLSDRWEDLWELSRMYVERLKSLEAALNGLVEVTDIVRQHEIMLSSFDDMPASLDKLRG
VHSQLLEFNMVLQQQQTIVDALNRNIALLRQHISRTRQSPNHPDVDRLEDEVQTSTVRWE
NVCSQVVDRLKTAEHALQTQMIYRTEYENEIRWLDNVEATINSLRKPEELLPEQYQQQLD
LLIAEYSQLQERTEAVENVNREGGKFIREAKGYDSRMVQYMENVINTHGPDIRNSFHRSK
PQPKNGVQQVTEELEHLNRRFAQLSSLILERRNIMQVLIQNWKRKKQEEDERRRAEEEEK
RRQFEAARLKALEDADRLRKQRKAAEDARRAAEEADRLRREREAAEDARRRAEEADRLRR
EREAAEDARRRAEDEARRRMEEDAKRRAAEDAARRKAEEDARRREMEDAERERKRKEDRD
RRRREKEEEERRRRDDEAKRERERRRLDDERRRAEDRRRQEEDEWRLREEEKRRYREKEQ
RRPEMPNLSHGMQQAIVSEGGELEEFEESRDVPERATIAEHEDEMQMYQEETITKTQFYE
MEGILHKQTGEILTFVEAIRQGLLDLHSGGGEFYDIVSGARISLEKAAELGYIDGGFHEV
LNTHYGVRHPETGESLSLLEAIQIGLYDPDIRQLRDIETGDILPMYDCISRGIITLDTQH
RLVKMGVLKLPPLSLESAIEQGVVNKETGHFTGKYTRETMPLKDALYNGYIQIGGCHPHT
MIATSLSDCLETGLIDGSTGEFVDKHSGEKITLREAVSKQYALLNLHVPEIVKTDENRRI
TLGEAIVRNAVNTRQGNFNDLLKSQTLTLQEAFLRDLIQKPLTLTEISQKDLIDSTNKFI
DGGTKSRFTLLEAIAVGLLDPDVRHIVDPDEKDVISIAEALERGLLEPDGRIMLQKQQKV
FSVNEAVSDGLLIKRVRHSIFNVKGIKNTKTGENLTFNEAVDRGVIILQAERVIDLATNE
SFLITDCMDKDLLDPMLFELLTTLLGIRNGPKQQDMTVIHAVANGFIDPQKGIYVDKRTN
RELSPKQAYDDGLLTLKGALQLSAMLDIHPSLVTPIKKIDHKRRIRRPGQREDTTTNEVK
VTLAEAMRQGLVDSRTHRFRQGDTEMSFEEALSQGLIHPSDEWIVPSRAGAGPTVEEKIT
ESVAETAQQLAPKFYPDKNVEETVTTVRKVRKTETTALGGPGGVSVYRAVTGSKDSFEIP
ADGYHVLEAERKDYVNLRTGTVSLPNLSRSLTLQEAFQLGVLDSKSITVVDPSSGNHIPI
IEAMNKKTIDKNGCMERDGQMINFETLINNKIVLVEAEAPVGLGNSKKKVIQFSPGSEAV
ISFRPIGTPTVEETEQSWTFDSGRGELVDHVTGERLTLDAALAFGKISREDLRVFDTLTA
REMSFEEAEKWGVIDEKDHYYLDKRENKRYSLAQAALQHRVFPTGGVPENASDAIHTTYK
IQKRSESSKKEALFGETAEYAEQTLVNALDSDWYSAQSGMFTDPQTQKQMSLKESIIKGL
FNPYSTTVLDKRRMRELSLLEAIDENIINDTEGTLLDTETGKFIDLKTARSQGFLKSRGL
PDSLEGALVSGKLDLSTGRLTTPGGGSVKVEDAIAAKLIDSQSIIFRDPLTGEELPYSVA
IENKVIDPVKGIVYTKNMTEVMTFPQALTSGVLTGYGSRAYTPPKPQSARLVERKLQLTP
YAPEPVKKSAVAVMEQRALGPGRQEIVDLGGGKQVVVKVVRGEGGVERGEYIDPSSGMKF
TIQLHGDPYMTEAKTVVKSTAQVQSIQLEPHAEFVGIDKIRDKRNGRVISNIQNAVTRGV
VDARGEKLSLEDAVRAKLVDLKSLTYLNPKTGDALTLAQAANMGLVDVTLSETLPKGVSH
PANGERISVQRAIELGIINPKTGEVKNPFTNEKLAWLDIMKPVYTSLTMEGVYDPTKGYG
VPVLTALTEGLIDVSTGQYSNIITAETITLKDASNKGLIDTETYKAITEPFLLDYRTKRK
LNLIEAVQNKLVDPRNKTIQFDEQIIMPVSRATAEGKIPLFIGEKLKRIDKMTFAEALSK
GMIDVAQNRFTDSDSGKQMSINHAIEEGYIDTGNVEAQEGSDDRNLANILFTEEFDEISG
RIRDKKSGLYLTFKSAVDRDVIDGDSLLHDLESSHTMTIKEALNQGLIDSDGRYIHTRTG
VKITLKDAVAKGLIALISSPMQAAQAVTEAVKRRDAEGYRFKLDSVDERKIGSGTPRYRE
EIMIGKLSSPHRSEPGLSRRVRSVSEASRGSRGKSLIDDPQAMADLQHEFLDNLRGRGFD
VEEKVIEHPEGSSRVSVREATESGLLDVITGDIVHPVSGRRYSIPRAVHMKMMTPDAAKQ
MMETLNISVEELGQTPLIESVSVSPSESGVKIYTKTVSWRGQPSELRQTTDPLAPYTTYT
SSTSSTTMRTSDVFTQ
Download sequence
Identical sequences A0A1S0UBC7
LOAG_00505T0 XP_003136093.1.37734

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.