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Domain assignment for LOAG_18896T1 from Loa loa v3.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  LOAG_18896T1
Domain Number 1 Region: 267-417
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.47e-30
Family Ribonuclease PH domain 1-like 0.0017
Further Details:      
 
Domain Number 2 Region: 3-109
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.28e-25
Family Ribonuclease PH domain 1-like 0.00037
Further Details:      
 
Domain Number 3 Region: 373-470
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.19e-20
Family Ribonuclease PH domain 2-like 0.00021
Further Details:      
 
Domain Number 4 Region: 103-197
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 8.12e-18
Family Ribonuclease PH domain 2-like 0.0024
Further Details:      
 
Domain Number 5 Region: 196-295
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.000000000000288
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0012
Further Details:      
 
Domain Number 6 Region: 482-543
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000132
Family Eukaryotic type KH-domain (KH-domain type I) 0.0067
Further Details:      
 
Weak hits

Sequence:  LOAG_18896T1
Domain Number - Region: 827-859
Classification Level Classification E-value
Superfamily BRCT domain 0.0353
Family 53BP1 0.046
Further Details:      
 
Domain Number - Region: 546-616
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0561
Family Cold shock DNA-binding domain-like 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) LOAG_18896T1
Sequence length 916
Comment | LOAG_18896 | Loa loa V3 3' exoribonuclease family (917 aa)
Sequence
MVQVLATVVGRHSSTSDTADFMPLTVDFQQSASAVGRIPTNYLRRELQRNDADILASRMI
DRSIRPLFPKDYSGETQIICKPLAVDDDGDPVMLGLNAASAALTLSDIPWEGPLGAVRIA
LINNEIVVNPSRKNMKISSLDLVIAACDDGNRILMIDMDGCETGIEKFAACIETGLQAIS
YLIQAINKVRDSCGRQKRQNICGEIDIDMIALMEEMQILYGDQLYHILTDIEHDKLSRDR
AVSALGNHMLESLKERSTPHKLRHTFTNLLKKSLREALFKSERRCDGRKFDELRPVDIKM
DVHKKLHGSALFQRGQTQVFSTVTFDAPSAAFQPDALSQLLEDFPYCLRLACDVLESNGS
SSMASVCAGCLALLDAGVQMKTPAAGVAMGLIIDKERNDYRILTDINGLEDFAGDMDFKI
AGTVRGYTAMQLDLKVPGIKPEVMMESLEQARNGLEHLLQLMRKAQPFCRNHFKSTVPVH
ETIPVEIYKRHIIFRSGGYNAKLIESETGAKISVEDDANISIFAPNKVKLEEAKMMLTKM
FESESEIELVFGAMYKGEITDVLEHGVLVTLHKSMKPILLKNSNLDVRNVAHPKVLGFKV
GQKIIIQYLGRDPNTGPYQQVEQALFQSALLQDPTVTNPYWRAHTVLRSHDHFWNITLRE
ERICGPSSSSSISSKTVSSERQHPMRALCKLCMVQEEETTKESYPTGVPTVHILQRLSVA
LSSFTPPHEMVLERTSKGFSKSPVQEIDEYFELVAKLGRPLFKWEIIRCAFLWKLEQTMS
EMLCIEAESAVTEDDKKMLISDDNLRQQRQFILQKAAEFDGTPFTFQRLCELLISPSRHY
KRTDKYLRALEKNINVVTTITESGERVTGVEPFPGELDISSTLRIEEPFFVQVDECDAPV
ETKLIAAGDYFSRVLD
Download sequence
Identical sequences A0A1S0UDF8
LOAG_18896T1 XP_020304646.1.37734

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