SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|392399465|ref|YP_006436066.1| from Flexibacter litoralis DSM 6794

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|392399465|ref|YP_006436066.1|
Domain Number 1 Region: 7-153
Classification Level Classification E-value
Superfamily PMT central region-like 0.0000034
Family PMT central region-like 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|392399465|ref|YP_006436066.1|
Sequence length 340
Comment hypothetical protein Fleli_3971 [Flexibacter litoralis DSM 6794]
Sequence
MDNQENEEYKKVLQEIKQMIAQSRVAALTKVNQEILLLYHNIGTQILQKQKQRGWGAKII
DTLSKDLSDNFPKMRGFSVRNLKNMKKFAVAYSGTQIVQPLVAQLSWTHHIILLNKFEDE
KTRNWYIEKSAKEGWSKRVLQHQIQLEVHKEFGSLPNNFDTHFPQTEAESITQLFKDESI
FDFLSLDEKNKEKDLENELVKNITDFLLSLGKGFSYIGKQYHLEVSNQDFYIDLLFYHYK
LKCFVVIELKIDDFKPEYVGKLNFYLSAVDDLLKQKEDLPSIGLLLCSSKNDTIVEYALR
DVSKPMGVASYSITKTIPKNLKDNLPTEQELKSVLKRTLK
Download sequence
Identical sequences I4AQN8
gi|392399465|ref|YP_006436066.1| WP_014799696.1.630

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]