SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for cassava4.1_001258m|PACid:17990863 from Manihot esculenta v147

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  cassava4.1_001258m|PACid:17990863
Domain Number 1 Region: 508-666
Classification Level Classification E-value
Superfamily TPR-like 3.49e-21
Family HAT/Suf repeat 0.081
Further Details:      
 
Domain Number 2 Region: 413-486
Classification Level Classification E-value
Superfamily TPR-like 0.00000000000125
Family Tetratricopeptide repeat (TPR) 0.074
Further Details:      
 
Domain Number 3 Region: 675-754
Classification Level Classification E-value
Superfamily TPR-like 0.0000000000237
Family HAT/Suf repeat 0.039
Further Details:      
 
Domain Number 4 Region: 85-176
Classification Level Classification E-value
Superfamily TPR-like 0.000000000055
Family HAT/Suf repeat 0.024
Further Details:      
 
Domain Number 5 Region: 17-68
Classification Level Classification E-value
Superfamily TPR-like 0.000000796
Family HAT/Suf repeat 0.014
Further Details:      
 
Weak hits

Sequence:  cassava4.1_001258m|PACid:17990863
Domain Number - Region: 207-298
Classification Level Classification E-value
Superfamily TPR-like 0.000596
Family Tetratricopeptide repeat (TPR) 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_001258m|PACid:17990863
Sequence length 917
Sequence
MSISRELYPSQDDLLYEEELLRNPFSLKLWWRYLIARREAPFKKRFIIYERALKALPGSY
KLWHAYLTERLEIVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLITR
TRRTFDRALCALPVTQHDRIWELYLRFVSQEGVPIETSLRVYRRYLKYDPSHIEDFIEFL
VNSRLWQEAAERLASVLNDDQFYSIKGKTKHTLWLELCDLLTRHAKEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRGLFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESMV
AHKMENLDLSDEEEDELEENGSLQDEDVRLEVNSKFEKKILSGFWLHDDNDVDLMLARLE
YLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTKQILTYTEAVRTVDPMKALGKPH
TLWVAFAKLYENHNDLVNARVIFDKAVQVNYKTVDNLASIWCEWAEMEIRHKNFKGALEL
LRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEEGLGTLESTRAVYERILD
LRIATPQIIINYSLLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAIEMTPADSVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEKLEMY
KIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELEKSLGEIDRARGIYVFA
SQFADPRSDEDFWNEWHEFEVKHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQR
LNIDEAKDKLKLAGVPEDEMAALERQLAPVANNAKAKDSSRKVGFVSAGVESQPDGAMKG
NANQEDIELPEESDSEDDEKVEITQKDVPSAVFGGLVRKREETEKEELGDHATAAKDKDG
GAGPLGALERIKRLKRG
Download sequence
Identical sequences A0A2C9U864
cassava4.1_001258m|PACid:17990863

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]