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Domain assignment for cassava4.1_034374m|PACid:17982513 from Manihot esculenta v147

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  cassava4.1_034374m|PACid:17982513
Domain Number - Region: 17-72,245-305
Classification Level Classification E-value
Superfamily HCP-like 0.00235
Family HCP-like 0.018
Further Details:      
 
Domain Number - Region: 45-82,153-213,382-405
Classification Level Classification E-value
Superfamily TPR-like 0.0296
Family Tetratricopeptide repeat (TPR) 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_034374m|PACid:17982513
Sequence length 705
Sequence
MPLPSQNRSFYNSLIQFSQQKSLQKGQALHAQIIKDTSSSSCIYLANGLVNFYAKCGHLP
KAKLIFQQIRDKDVISWNCLINGYSQRGHSGSSIVMDLFQRMRAENTFPNAHTFAGVFNA
ASNLSCTLGGQQAHALAIKMASFYDVYVGSSLLNMYCKAGLHLEARKVFDIMPERNAVTW
ATMISGYAIQRLAREALRLFEWMLKEDEDLNEFVFTSVLSALAIPEFIDSGKQIHCLAVK
SGLLAFVSTLNALVTMYAKCGSLDDSLQVFETSGSKDSITWSAMITGYAQSGDSQKALKL
FSKMHFCGIKPSEFTLVGVLNACSDIGADEEGKQVHSYLLKLGFEFQMYIMTALVDMYAK
CGCTADARKGFDYLQEPDVVLWTSMIAGYVQNGENEDALSLYGRMQMEGILPNELTMASV
LKACSSLAALDQGRQIHARTIKYGLSLEVPVGSALSTMYAKCGSLDEGNIVFKRMPERDT
VSCNAMISGLSQNGYGKEALDLFEEMLLEGTKPDDVTFVNVLSACSHMGLVEEGWAYFKM
MFHGFGIVPRVEHYACMVDVLSRAGKLKEAKEFIESATIDHGMCLWRILLSACRNYRNYE
LGAYAGEKLMALGSQESSAYVLLSSIYTALGRPEDVERVRSTMRVRGVSKEPGCSWIELK
SRVHVFVVGDQIHSHIGEIRLELRRLRKHMKDEGYQPASTNFDLN
Download sequence
Identical sequences A0A2C9W241
cassava4.1_034374m|PACid:17982513

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