SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for cassava4.1_001474m|PACid:17980846 from Manihot esculenta v147

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  cassava4.1_001474m|PACid:17980846
Domain Number 1 Region: 1-63
Classification Level Classification E-value
Superfamily SAP domain 1.53e-16
Family SAP domain 0.0052
Further Details:      
 
Domain Number 2 Region: 110-169
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000000421
Family PHD domain 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) cassava4.1_001474m|PACid:17980846
Sequence length 872
Sequence
MDLVTSCKDKLAYFRIKELKDVLTQLGLSKQGKKQDLVDRILAALSDEQVPKTSVKKSAV
GKEEVAKLVDDIYRKMQISGATDLASKGQGVLDSSKAITKGDVDDSFHLDTKVRCPCGSS
LETESMIKCEDPRCRVWQHIGCVIIPEKPAEGNPQVPDLFYCEICRLSRADPFWVTVAHP
LYPVKLATSNIPTDGSNPVQSVEKTFHLTRADKDLLTKQEYDVQAWCMLLNDKVPFRMQW
PQYADLQVNGVPVRAINRPGSQLLGANGRDDGPIITPCIKDGINKISLTGCDARIFCLGV
RIVKRRTVQQILNLIPRESDGEHFEDALARVCRCVGGGAADNADSDSDLEVVAESFAVNL
RCPMSGSRMKVAGRFKPCAHMGCFDLDVFVEMNQRSRKWQCPICLKNYSLENVIIDPYFN
RITSKMLHCGEDITEIEVKPDGSWRVKTRTEAERRDVGELAQWHYPDGSPYGGEVKAKVE
MDKQIKQEGTSEGYAGTGLKLGIRKNCNGFWEVSKPEDVNTSSSGSRLREKFENHEQKVI
PMSSSATGSGQDGEDPSVNQDGGGNFDFTNNGIELDSLSLNVDSAYGFADRNFSAPVGDA
EVIVLSDSDDDNNILMTSGAVYKNNQADDDGADFSIPPPGTYPEDPAVGNGLGFLNADDE
FGMPMSLWQMPPGSQTGPGFQLFNSDGSDALVDLQHGPINCPMSMNGYTLAPDTVMGPAS
LVPDSSIGRSDADMNDGLVDNPLAFGGEDPSLQIFLPTRPSNASGQPDLRDQADVSNGVR
TEDWISLRLGGGGATGSHGDSVPANGLNSRQPMPPREGAMESLADTASLLLGMNDGRSEK
SSRQRSDSPFTFPRQKRSVRPRLYLSIDSDSE
Download sequence
Identical sequences A0A251JWB1
cassava4.1_001468m|PACid:17980847 cassava4.1_001474m|PACid:17980846

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]