SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ML034622a-PA from Mnemiopsis leidyi

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ML034622a-PA
Domain Number 1 Region: 377-545,611-742
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.0000000000000394
Family Rhodopsin-like 0.0056
Further Details:      
 
Domain Number 2 Region: 133-166
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000288
Family LDL receptor-like module 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ML034622a-PA
Sequence length 767
Comment pep supercontig:GCA_000226015.1:ML0346:211269:213572:1 gene:ML034622a transcript:ML034622a-RA gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLSTNEVIRFLVIFATVCSTDVYIRVDTACLDRSSIIQDLDGLSCSEKIMPRTVECIEL
TDHPEPHNNLTCDFNLDPKSKDHIGGNPEKFLDFDKIDFNTITWSCSLSHKSEICDGVSQ
CLTDECHCSGNDTELFFCADGLGCISWDRLCDGKQDCMDGSDECFCTGVGIFHSEEIEGR
LCMPEYEEDYCGFGMVWYTNFTAKEGRCDDHGYGPAQEHSVDMNPIETCLMEVFHEFYYI
FYNSPTRLVEYCQTNCSYVENFDDGWIRYCDHIVKGYLIDFEFQCDVQQTSFERYHVSKI
CDGVFDCTNQLDEHACPLPERFYCNPNETAEWVNTDKVCDKVKDCANGFDECGMCQFEVL
SSSKFLIQSKIVLALATIMGFLIIGLNFKEELNCWLMTCSSKIKAIDRVFLLQIFFYDIL
MGAYMCFIVLAAVVLKLKGDYCVIAEEWRASVFCSSLGVLFSFSSHGSLLAIASVSIIRF
LTCHNLLFEIKKRTVIIGSILITGLNLFHSVLPLLSLNQIKDGFRTALFLSNINLNPFFD
SNPINISRLKYIYEGMLHKPSDTDVHTMVSELAILTNKSGVYDFFEIGYYGNTGLCVHNI
FKDEDFQKSYKLYKILYCSALIVLLLIVSAAYIMIVCKQKRSFRETNPLRANQGSAANAL
TLKVALVIGSQLVCWIPFIMTVFYFQYVTSEPPSKLVFESFALVIIPINSFLNPLFYGER
YKKVESVLRRKWRQIVSSLKPEPTYPDCGLELEEKVESPRTPDNPET
Download sequence
Identical sequences ML034622a-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]