SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ML051211a-PA from Mnemiopsis leidyi

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ML051211a-PA
Domain Number 1 Region: 2272-2453,2530-2647
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 2.84e-18
Family Rhodopsin-like 0.0065
Further Details:      
 
Domain Number 2 Region: 270-347
Classification Level Classification E-value
Superfamily SRCR-like 0.0000000000301
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0021
Further Details:      
 
Domain Number 3 Region: 793-869
Classification Level Classification E-value
Superfamily SRCR-like 0.000000000824
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0022
Further Details:      
 
Domain Number 4 Region: 50-127
Classification Level Classification E-value
Superfamily SRCR-like 0.00000000327
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0038
Further Details:      
 
Domain Number 5 Region: 672-749
Classification Level Classification E-value
Superfamily SRCR-like 0.00000000458
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0044
Further Details:      
 
Domain Number 6 Region: 466-543
Classification Level Classification E-value
Superfamily SRCR-like 0.00000000562
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0025
Further Details:      
 
Domain Number 7 Region: 157-236
Classification Level Classification E-value
Superfamily SRCR-like 0.00000000889
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0059
Further Details:      
 
Domain Number 8 Region: 2192-2225
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000249
Family LDL receptor-like module 0.0026
Further Details:      
 
Domain Number 9 Region: 563-642
Classification Level Classification E-value
Superfamily SRCR-like 0.00000017
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0055
Further Details:      
 
Domain Number 10 Region: 900-983
Classification Level Classification E-value
Superfamily SRCR-like 0.00000366
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0076
Further Details:      
 
Domain Number 11 Region: 1014-1112
Classification Level Classification E-value
Superfamily SRCR-like 0.00000536
Family Scavenger receptor cysteine-rich (SRCR) domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ML051211a-PA
Sequence length 2722
Comment pep supercontig:GCA_000226015.1:ML0512:45212:63547:1 gene:ML051211a transcript:ML051211a-RA gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MYVSHSPRRTIANFRGYIRTAAEENIFTLVDSDGSPIEGQQLGLLLYKGGTVCDDNFDDT
AAEAICRYMNSSFTAFLWTSEKTFDIQNNFDITLDEVQCGSAEWESCRYSEENNCGHSED
VFLSCKPDAEENIFTLVDSDGSPIEGEQLGLLLYKGGTVCDDSFNNTAAEAICKYINSSF
TAFLWTSENTFDIQSNFDITLDDVQCGRAEWESCRYSKEHNCGHSEDVFLSCKPSGGIQT
DAKKKIFILVDSDGNPIEGQQLGLLLYKGGTVCDDSFDYTAAEAICRYMNSSNTVSEWTT
ANSFYIQSNLHIALDDVQCSSSEWESCRYSEEHNCGHSEDVFLSCKPGLDDHLSTTTNSP
YTRPASEASTSGTNPIAPGELQIPDFHEAVCFTNYQQDVGMFPDSAIIASRTLTGLKECR
EWCDGNENCVAAVVSPNAEENIFTLVDSDGNPIEGQQLGLLLYKGGTVCDDSFDDTAAEA
ICRYMNSSNTALLWTSEKTFYIQDNFEITLDDVQCGSAEWESCRYSEENNCGHSEDVFLS
CKPDSDGNPVDGEQYGLLTYKGGTVCDDSFNNTAAEAICKYINSSNTALLWTSDRTFDIQ
SIFEITLDDVQCGSAEWESCRYSEEHNCGHDEAVHLFCFSKPTDTEEDIFELIGFDGNTA
KGGLGLLLYKGGTVCDDSFDNTAAEAICKYMNSSNTVSEWTSGIRYDFQNRIKINLDDVE
CGSAEWGSCEYSEEHDCDHDEDVHLICASSEEHLSVYFEWNIAAGVKGDLFSLVDSDGNA
VEEELALLLYKGGTVCDDSFDNTAAEAICRHINPLYTAFLWTNGNRFENQNSTNITLDEV
QCGRAEWESCRYSEEHNCGHSEDVFLFCRAEWKFPMVELIDSDGNAVTDNQQGLLLYRGG
TVCDNRFDFKAAEAICVHIRNSSYTALTWSSGNRYSIQMNIEIKLYDTQCVSHEWKNCSH
YVWDVHNDTCNQDHRNDIFLTCSLASELPLLALVDNEGNDVEEEELGILLYKGGTVCGSG
FTYKAADVICKELNFTSCRSWNYAGHNPSNPSNSSNWRLDDYPMRLGRVDCSDTDCSYTE
GCHVGGSGSTVCEFAIDEENECAENEDVFLSCNNDFRNDSKISVKRGIIVPGAIEKLFLQ
LETQNSEIGGDTTEIWFFDEEFSHAGSISVLFESDARIRYKLGDCMSNYTSAVALCPPRD
GNEAHWVISKDAQTVKAFCNGKKIIDITASEEICEMRSGWTTIYGREVTAINFPENDTAT
LSYSLGLYLNTWNDMVRDIAINVELETSYLRIKTDSLQGRGDKISVTFLDEDSSYAGAIN
IHFEMNLNNRTTFNLPNCMRYYRYIQPSIPTEQHKVWTFEKRGRRIKVYCNGKKVIEVTA
SPELCDDPENLNSWATYYDRDVHVIKFLVPHDSASDSFFIGLYQLDKEIGEIEKTDKLGL
LVMTYSLGEKQVHGTVCAPISDHTVANRLCSMFGYQHGHWESLPYNFALVPQWRYDGRCG
VNYPLPDGSPAECDPEGDNPCCSEKLGSCGSTNQHCACGEGCYDYRKSAETTCEQAEVGG
FLKTFCFDHQSNKHFYKCPNSDITYEVSMDRWVSSLGSYTLSKVTSVCDDDESFYQACGF
NTPLTNGEILCGGRIQEIPGSGGIFVPTKTEERCNDKNCNDLSPRNRKADPFHCDGKCDT
PTTCEDESKCGGYEYGLSCRKPNGKRLYVPPHWICNGQSGCEDQRDESGCHSAGQLQTCV
QYHLKEKTGKAVRVPIFNNTRCAAFDISKGIYPYCANFEDQVDCVDNNRIGGYCMVGKVL
RIISKSMVCSHKNDDQHNDDDDHAEKDDHKGDDDDVNEDHDDDHNERDDHNDDHNDDHND
DHHDDDDDDNDDDDHADNDDHEDGHDDDDDDDDEEHDDHGDHSALCDNDIENDCFSPSTS
TSCLVHKHRLCDGIKDCPDGSDELVDICEFKVDVLHCRRGFGIDEDIPIPVSWIADGKAD
CRNGLDEHYGFLHNETDLHFCKFEDHFGQEITQIEESSCKNVFLCPSLFQGANRRKSFVK
LSLLCDGVESCPGENEVCKTSRDYPTLKKEVSYGDRIGDLCSVLEDDNVDCETKAFVHIT
EKVFGVDTFANGSERLLNVPKRKISCKGLFGEFYVFLSCMGLCENSDCPLKGKTLAHDSC
PGQYPDRVYTFAKDASDNSRLTFATKSDIGYHNQYFECKNTRCIKYSQVCDLVNDCGDMS
DEHNCNNRQICESTKNDSNPHLISLSQKCNGIFDCADLSDECNESCGREIMEGWVLKVIC
WILGLLAVLFNFIAVVKTLTSLNKIRTGVMFQSKILICLVALGDLLIGVYLILLSIYDSI
IFGKSYCENQAEWLSGNMCSFMGIISTIGSQLSLFSMTILSISRAVGITMGSMSAPSNVN
KIWVAKVIALAFAITAASTAIALIPLAPSLEDYFVQGVFYPPEYKLFTGFPNKEKHLAVI
RAYNSSINDTVLSWKEIRAHVDTMFTDNSGALSRKTVHFYGNDGVCLFKYFVRSDDPTRS
KEMGTTNSQENMIVWLMLLVNFLCFAAIAVCYGVINNHTLKSLANSGQAKDEKAVQKSQK
VQNRVTLMIITDFLCWVPFIVICALHNRQAIDATTWYVYFAMIVLPINSVINPLLYDKTV
TDFFVNLYRRVMVLLGLREEPVRVESSAVSSQVTGRTSVASRGWGSVAPRTSTASTRVSV
VNTFNSINKRPSVQAKPRLSKI
Download sequence
Identical sequences ML051211a-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]