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Domain assignment for ML218928a-PA from Mnemiopsis leidyi

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ML218928a-PA
Domain Number 1 Region: 683-876,936-1061
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 3.39e-18
Family Rhodopsin-like 0.0058
Further Details:      
 
Domain Number 2 Region: 616-649
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000275
Family LDL receptor-like module 0.0022
Further Details:      
 
Domain Number 3 Region: 651-686
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000628
Family LDL receptor-like module 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ML218928a-PA
Sequence length 1097
Comment pep supercontig:GCA_000226015.1:ML2189:317962:327447:-1 gene:ML218928a transcript:ML218928a-RA gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVQGTRGCSSACQREKSVQSSQDFITNKIALTTLQFHVLNHQEECRLVEVKQEKRYLKIK
CGDKYKCPRSDVLYSVERYRDDPAWNKWAADCTLKYDVQCPNDPKFYEVCGHNREGCKTG
TSDTKFCETYICQYQNQTYTYMDGTITFGTRMLSGIVNTRYANCDMHHTCSNTLLDEEGC
ADPDQAFICKGEIDTLIPAEHVCDLKCDCYRCNEEAHCNNQTYGVDCDSIYGWHLHAMYN
CNDYNECREGEDESDTHCSPDKIVRYCVPGDLHGPDYYNFFPDEFIRPLYAHQICATPRL
APFAWTCQDGMDQINCTDTTRVAMECEVRGHVTTVSVFALCRGYDLCSDGYQNNCYEVEG
GCLLHKTQLCDGHNDCPDGTDESKTFCSTMSRTQCVRRVSLRPGSSKAKMEFPLSWVMDG
VVDCEGGIDEKEESWLRCGRDLSRRYIEKVSGCRDVFLCDRGDPQSTYADFDDLCDKVAS
CGKENRVCEQAKSLISTWDLVPGEEVKRTSFCQRGLDSLAPLRGSCTKHSFEGPDKGILG
ISTTDVYIPSDKQECEQAYGELYVFLSCSGKCKTATCPLTQVDQTSCSDIPVKDQVLSLT
EDYRMTIVVKRKGEYFSHYFSCRNKRCTTYDKVCNLVNDCGDESDEENCQNHFRCQDTGE
YVPLSSICDGSVDCRDYSDECGDSCSESSRNLLQNLSLKAFAWVSGVLATLLNLFIIGSH
AKEVYDSRYLRSRIDKLLILLVALGDFSIGVYLLSIAAVDHHYQEQFCRLKFQWLTSGHC
NALGVLSTIGSQLSLFSMASLSISRVVNINSLVQKESKTWTSRIKVLTLLTTLLLSSLAV
AFFPLLPVLEDFFVNGLHYDKVTLFTGMVVKDTHYRILQSYNGRYRNEPLSWTRIRLMVR
EMFSKDYGGVQGSKVEFYGSDSVCIFKYLVTQSDPQHIFSLAILLLNFLCFILISVCYIV
IQYFVSRSSSRVTTDTPASRRRELKLQTKISIIIATDFLCWIPFIVVCLLHFFEVIDATS
WYPLFSIIILPLNSIINPLLYSDLVTKIIRGFIQTGSRGLSTIRTGTGGVSGVGESMSVT
GTEVRTGTRDKAETTGV
Download sequence
Identical sequences ML218928a-PA

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