SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ML351725a-PA from Mnemiopsis leidyi

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ML351725a-PA
Domain Number 1 Region: 756-927,1001-1139
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.000000000000146
Family Rhodopsin-like 0.0038
Further Details:      
 
Domain Number 2 Region: 678-712
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000223
Family LDL receptor-like module 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) ML351725a-PA
Sequence length 1185
Comment pep supercontig:GCA_000226015.1:ML3517:242568:246125:-1 gene:ML351725a transcript:ML351725a-RA gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQQEGWGADNTSTSRCLLDHMCKNMGFQFAIDYFPKPLRFVDVGTALFTLDELSCTVDTN
ETDGENVPTFRLTKVNKAKVDRLKKRIGNKDTILLLCGPFSENCPVVEKDNFLKKVCLED
FGTTILQCPFSKTLYTSVVYSPEQYIALSTICENDPHFYQSCGSRDVSTAHRSTASINNP
AICDDFICTASADNKPLRGHSLVTNSYRLVSATELCSKKTACGRKQCQNKNEDCHDLELP
EELCSTMIELPTGIIAPKSKLCNGKCDVHYRCEDEAICEGLVYGAYCMGYDGNLVYVKPS
DICDGLSSYLCPNNEEESGCPDPKSLLAEDKCEKYEASPLPFIPITNRTRCTAPWKDKSL
IPLCANFIDQTNCTDQSRSRVVCPINGFRSTVSKFFVCHGQAEIPALCDNGMDQVCLEDQ
ASLTCSLHKHQLCDLIRDCPDGTDENLSICRSMADKKCYRAYIHKSALRIPLAWLKDGVE
DCLDGLDEQDIWPSCGEGRTQRFVASDKVSCGEVFLCSHQQNAFVQFQDLCDGLGSCGNE
KSMCDKSQLALPTLDKAVMTFEKSDKVEKLLFYCLPGLESLQKDTNSCIHHDLGSIGMKV
FGIKDLSIIIPDRKINCDYTFGEIYVILSCAGLCTNSICPIRNKIKYNSCPGQYSNRIFT
VADNTYLSFVTKSREGYKNNYFLCDNGFCIRYDQVCNLIDECGDGSDEQHCTNVHMCDSK
MQLIPISEKCDGKIDCSDSSDECNSECGRDILQSSILKFMCWLLALLATTLNIASITRCV
SRFGWKMSVGALYNKLFILLINLGDLLVGVYLLQIAVMDSIIYRGRYCRNQVSWLSSSHC
SLLGVVSTIGHEVSLSSVTVLGLARAISISNGVKISKNVSRISISKIALNAVTIVAVSLA
IAWTPLMPPLEDFFVNGMTYDPLVRLFIGSPGKNIHLNILQEYYGKVKEKDLKWRVINDL
VDDMFSHDYVDNAIGRKKLNFYGNEGVCLFKFFVKAGDPQKSYAWLILIVNMILLGIISA
CYIFINANTRENSHVLTREKTPMKERIQKRNKKLQRKISLIIATDLICWLPLTVVSCLHS
AEILVATPYYSLISIVFLPINSVINPVLYNDIFIQAVKDCARRLFQYSDLPKSQAQSRQS
RESASPFAIRIPLTTPRTGTGSLISTKSGTATTTRFGFREGLESV
Download sequence
Identical sequences ML351725a-PA

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]