SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for psu|NCLIV_058100 from Neospora caninum Nc-Liverpool 6.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  psu|NCLIV_058100
Domain Number 1 Region: 39-188
Classification Level Classification E-value
Superfamily Major surface antigen p30, SAG1 0.0000000000929
Family Major surface antigen p30, SAG1 0.0074
Further Details:      
 
Domain Number 2 Region: 246-358
Classification Level Classification E-value
Superfamily Major surface antigen p30, SAG1 0.00000235
Family Major surface antigen p30, SAG1 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) psu|NCLIV_058100
Sequence length 391
Comment | organism=Neospora_caninum | product=SRS domain-containing protein | location=NCLIV_chrXI:4328291-4329737(-) | length=391
Sequence
MAGPRAVPVRKTMMVALFMVVTVLMSTTVLGNKGRTSTPATVTCDQSTASAGISVEVDAD
TKRASFVCGTGFNQVLPSSKEDHTVTKCYMTEEVGQEENEKSLVELFGDGSEATVKTPSE
REQQGSEVTLSLGKLPQRRTTIYFHCTGGSTAAGVPGAGAGGLGARRLAAAKAAAAGNKC
VVTVTVPADPAANSKPELCYIRFKTVCGRLVSPQPVSIYKLSSASFSLVVRSVCHCTPGC
YSPMPAACTVAKKNMDLEITNESKSVSFQCDTNIDRLNPENPADLIFDESCQNPVKLADM
LPSAKLATSTSGYTFSVEELPETAGTFCYKCAAASDPEEEKEVSQPEPNACYVKIQVPQR
SNAASTSAFARSVQALLVGLGVSLALFQVTH
Download sequence
Identical sequences F0VNU1
XP_003885415.1.31604 psu|NCLIV_058100 psu|NCLIV_058100

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]