SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for OBART02G15730.1 from Oryza barthii 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OBART02G15730.1
Domain Number 1 Region: 187-508
Classification Level Classification E-value
Superfamily Terpenoid synthases 2.01e-91
Family Terpenoid cyclase C-terminal domain 0.0000011
Further Details:      
 
Domain Number 2 Region: 4-183
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 3.37e-51
Family Terpenoid cyclase N-terminal domain 0.0000497
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OBART02G15730.1
Sequence length 514
Comment pep:novel chromosome:ABRL00000000:2:13629977:13640701:-1 gene:OBART02G15730 transcript:OBART02G15730.1 description:""
Sequence
MAHYNKAWMIRLEKLKEEVATMITSSIACSLLERLQLVDALERLCVDHLFEEQINDLLVQ
ISSTNVMDCDDLHTVALWFYLLRKHGYRVSQDVFVKFKDEGGCFAVNSPRDILTLYNAAY
LGTHGEIILGEAISFAKRYLESTLPNLEGLLAHETKCALSIPLPRRVRIYEAKDHILTYE
KEHATHEVILELAKLSSNIMQLHYQEELKIISRWWKDLQVESRLSFARDRIVEFYFWIVG
VYFEPKHSRGRIILTMVIAIVTLLDDIYDIYGSTEECEVFTRCMERWDRKAAHDIPEYMK
FVYEKVLDAYEYIEDLLADEEKFRMSYLRNFTIDLVRAFNIEVKWRDARYVPATVEEHLQ
ISTRSGGCYLLSCASFVGMDHIATAESFIWVSSAPRIVCALCTILRLSDDLETFEREQVE
LHVAPTIGSYMKEHNVSVENACEKIKELIEDTWKDFNHEWLTLANVQPKQLLERIFNLAR
TMEFMYKHDDKFTNCQNLKDRIHSLFVETFASTY
Download sequence
Identical sequences A0A0D3F4V0
OBART02G15730.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]