SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NbS00005877g0003.1 from Nicotiana benthamiana 0.4.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NbS00005877g0003.1
Domain Number 1 Region: 1-145
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.12e-40
Family Protein kinases, catalytic subunit 0.00098
Further Details:      
 
Domain Number 2 Region: 203-312
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 8.11e-26
Family alpha-D-mannose-specific plant lectins 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NbS00005877g0003.1
Sequence length 566
Comment protein AED:0.19 eAED:0.19 QI:1812|0.75|0.77|0.88|0.62|0.44|9|0|566
Sequence
MPNKSLDLFIFDQSRSTLLDWPKRFNIIDGIARGLMYLHQDSRLRIIHRNLKTSNVLLDI
EMNPKISDFGMARSFGGNETGANTRRVVGTYGYMSPEYAVDGIFSVKSDVFSFGVLILEI
VSGKKNRRFIHPDHNLNLLGHLGIRMFVMIVEALDTITIDQQLKDGDKIISPGGVYELGF
FRPGNWTNRYARIWYKKISAGTVVWVANRNSPLDDTSGVLMFNPEGILVLINSTNSTIWS
SNSSKLLKNPIARLLDSGNSVVRDEKNSDPENFAWQSFDDPGDTLLPGMKLGRNFVTGLD
WYISSWKSIDDPATGEYVDRFDIQGYPQLFVWKGSSISFSSGPWNGLAFSGSPSLQPNTY
FTFGFVLNQEEVYYKYDLKNGSLPTRVVLTPGGLINHYTWIDRTESWFLYLTAQFDNCGR
FALCGPYARCVINNSPPCECLRGFKPKYLQQWDAADWSSGCVQFDNCDHFALCGPYVRCV
INNSPLCECLRGFEPKFPQQWDAADWSSGCVRRCPLACQQDGFRIFAGIKVPDTRKSWYN
ESIGLEECKMLCLADCNCTTYSNLDV
Download sequence
Identical sequences NbS00005877g0003.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]