SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NbS00036050g0011.1 from Nicotiana benthamiana 0.4.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NbS00036050g0011.1
Domain Number 1 Region: 496-800
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.16e-81
Family Protein kinases, catalytic subunit 0.0001
Further Details:      
 
Domain Number 2 Region: 72-183
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 2.88e-24
Family alpha-D-mannose-specific plant lectins 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NbS00036050g0011.1
Sequence length 831
Comment protein AED:0.10 eAED:0.10 QI:35|1|1|1|1|1|7|229|831
Sequence
MCQKKELSIVLAFLVPFCCSIDTISFNNSLKDGELLISSGKSFALGFFSPAGNFPGKRYV
GVWYNNVPEQTVVWVANRDNPINGTSGILTIDSNGNLVILDTKTEVSAWKTNISSAKNGA
DLYSAKLWDSGNFMLFQDPKMDIVAWQSFDYPTNTLLPSMKYGIDKKTGLNRFLTSWKSL
SDPGTGEYRYIMEFNGTPQVFLYRNISRIWRTGSWTGHGWSGVPEMSPRFIFSLSYVDND
NEVSMTYHIKDTSIISRMVLNESGMVNRVTWQESEQKWVQFWFAPKDSCDNYEHCGAFSN
CNLFNLGEFECSCLPGYEPRLSRQWYLRDGSHGCSRKKDENVCNSGEGFVKLSHVKIPDI
DTALMNKSMGLKECEHFCLKNCSCTAYASANISEGGSGCITWYGELRDIKQFTDGGQDFY
SRASASDLAQFSKNPDNNHRKLMTAIIVGSAAAIIVGLLLAYFLVISKRRKDKKSHSNTL
NKSLASCESMDGSEQTEISIFDLSTISNATDNFSVANKLGEGGFGSVYKGHLKDGQVIAV
KRLSVTSGQGAKEFRNEVTLIARLQHRNLVRLLGCCSQLGEKMLVYEYLPNKSLDSFIFD
KTKGSLLDWGKRCEIIHGIARGMLYLHQDSRLRIIHRDLKASNVLLDASMQPKISDFGMA
RIFGVDQVEANTNRVVGTYGYMSPEYAMVGQFSAKSDVFSFGVLCLEIITGRKNNSQYDQ
EKSQHLAGYVWDCWKNDKALDVVDPLLGDSYEACEVLRCIHIGLLCVQSFVDDRPTMSEV
VFMLCNETKLPFPKEPSFIFRSQNYGSVTPSTSASIGTSVNDMSITKIHGR
Download sequence
Identical sequences NbS00036050g0011.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]