SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSNLEP00000002460 from Nomascus leucogenys 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSNLEP00000002460
Domain Number 1 Region: 531-574
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000155
Family Classic zinc finger, C2H2 0.0019
Further Details:      
 
Domain Number 2 Region: 563-599
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000144
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 3 Region: 496-546
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000471
Family Classic zinc finger, C2H2 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSNLEP00000002460   Gene: ENSNLEG00000002058   Transcript: ENSNLET00000002590
Sequence length 604
Comment pep:known_by_projection supercontig:Nleu1.0:GL397444.1:295431:307935:1 gene:ENSNLEG00000002058 transcript:ENSNLET00000002590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TDPQTSMAATAAVSPSDYLQPAASTTQVNSQPSPLALLAATCSKIPPAVEAAVTPPAPPQ
PTPRKLVPIPAPLPLSPGKNSFGILSSKGNILQIQGSQLSASYPGGQLVFAIQNPTMINK
GTRSNANIQYQAVPQIQASSSQTIQVQPNLTNQIQIIPGTNQAIITPSPSSHKPVPIKPA
PIQKSSTTTTPVQSGANVVKLTGGGGNVTLTLPVNNLVNASDTGAPTQLLTDSPPTPLSK
TNKKARKKSLPASQPPVAVAEQVETVLIETTADNIIQAGNNLLIVQSPGGGQPAVVQQVQ
VVPPKAEQQQVVQIPQQALRVVQAASATLPTVPQKPSQNFQIQAAEPTPTQVPHPLYCPP
SSPLVTSFWLALKMMLIISQLDLTFESQYLLGWAVSGCFYLTDGLSLVHRAKLSKIAAVI
IIFVMCRRAEGLTRGFRLNLNSALFVPTGQQQLTVQNVSGNNLTISGLSPTQIQLQMEQA
LAGETQPGEKRRRMACTCPNCKDGEKRSGEQGKKKHVCHIPDCGKTFRKTSLLRAHVRLH
TGERPFVCNWFFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLV
TKNL
Download sequence
Identical sequences ENSNLEP00000002460 ENSNLEP00000002460

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]