SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSNLEP00000004442 from Nomascus leucogenys 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSNLEP00000004442
Domain Number 1 Region: 25-314
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 7.94e-81
Family Regulator of chromosome condensation RCC1 0.014
Further Details:      
 
Domain Number 2 Region: 355-465
Classification Level Classification E-value
Superfamily POZ domain 4.32e-25
Family BTB/POZ domain 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSNLEP00000004442   Gene: ENSNLEG00000003661   Transcript: ENSNLET00000004677
Sequence length 531
Comment pep:known_by_projection supercontig:Nleu1.0:GL397327.1:10237666:10271279:-1 gene:ENSNLEG00000003661 transcript:ENSNLET00000004677 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVDVGKWPIFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQ
STLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQ
VCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHI
KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC
GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAA
KTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATPAVSWRLLSVEHEDFLTVAESL
KKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPV
YRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKLCQHIIKRGITVENAFSLFSAAV
RYDAEDLEEFCFKFCINHLTEVTQTAAFWQMDGPLLKEFIAKASKCGAFKN
Download sequence
Identical sequences G1QU22 H2NJX0
ENSPPYP00000006118 ENSPPYP00000006118 XP_002824322.1.23681 XP_003270143.1.23891 XP_009246927.1.23681 XP_009246928.1.23681 XP_009246929.1.23681 XP_012362382.1.23891 ENSNLEP00000004442 9600.ENSPPYP00000006118 ENSNLEP00000004442

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]