SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSNLEP00000008166 from Nomascus leucogenys 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSNLEP00000008166
Domain Number 1 Region: 58-139
Classification Level Classification E-value
Superfamily MHC antigen-recognition domain 4.11e-30
Family MHC antigen-recognition domain 0.0000151
Further Details:      
 
Domain Number 2 Region: 142-236
Classification Level Classification E-value
Superfamily Immunoglobulin 1.96e-23
Family C1 set domains (antibody constant domain-like) 0.0000066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSNLEP00000008166   Gene: ENSNLEG00000006704   Transcript: ENSNLET00000008554
Sequence length 284
Comment pep:known_by_projection supercontig:Nleu1.0:GL397342.1:9536428:9539043:1 gene:ENSNLEG00000006704 transcript:ENSNLET00000008554 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTTNVRQGGSRCWEYCSGTVPKMKPIIFESEFLQLLSVLRFFLPVFCPPACHLHSSADHV
ASYGVNFYQSYGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISFDPQSALRNMAV
GKHTLEFMVKQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNG
HSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAP
MSELTETVVCALGLSAGLVGIVVGTVFIIQGLRSVGASRHQGLL
Download sequence
Identical sequences ENSNLEP00000008166

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]