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  Home > Genomes > Nomascus leucogenys 76_1.0 > ENSNLEP00000020496

Domain assignment for ENSNLEP00000020496 from Nomascus leucogenys 76_1.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSNLEP00000020496
Domain Number 1 Region: 1971-2194
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 4.32e-79
Family Fibrinogen C-terminal domain-like 0.00000198
Further Details:      
 
Domain Number 2 Region: 894-1064
Classification Level Classification E-value
Superfamily Fibronectin type III 9.43e-22
Family Fibronectin type III 0.00034
Further Details:      
 
Domain Number 3 Region: 1801-1965
Classification Level Classification E-value
Superfamily Fibronectin type III 2.18e-21
Family Fibronectin type III 0.00064
Further Details:      
 
Domain Number 4 Region: 1708-1797
Classification Level Classification E-value
Superfamily Fibronectin type III 1.88e-19
Family Fibronectin type III 0.0000207
Further Details:      
 
Domain Number 5 Region: 624-788
Classification Level Classification E-value
Superfamily Fibronectin type III 1.53e-17
Family Fibronectin type III 0.0012
Further Details:      
 
Domain Number 6 Region: 1260-1344
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000016
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 7 Region: 801-891
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000389
Family Fibronectin type III 0.00000291
Further Details:      
 
Domain Number 8 Region: 1169-1253
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000168
Family Fibronectin type III 0.0019
Further Details:      
 
Domain Number 9 Region: 1621-1708
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000213
Family Fibronectin type III 0.0016
Further Details:      
 
Domain Number 10 Region: 1078-1162
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000104
Family Fibronectin type III 0.0023
Further Details:      
 
Domain Number 11 Region: 1530-1617
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000713
Family Fibronectin type III 0.0027
Further Details:      
 
Domain Number 12 Region: 1441-1526
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000292
Family Fibronectin type III 0.0025
Further Details:      
 
Domain Number 13 Region: 1348-1435
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000047
Family Fibronectin type III 0.0034
Further Details:      
 
Weak hits

Sequence:  ENSNLEP00000020496
Domain Number - Region: 412-435
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000445
Family Integrin beta EGF-like domains 0.065
Further Details:      
 
Domain Number - Region: 505-528
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000773
Family EGF-type module 0.047
Further Details:      
 
Domain Number - Region: 474-497
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00129
Family EGF-type module 0.093
Further Details:      
 
Domain Number - Region: 536-560
Classification Level Classification E-value
Superfamily EGF/Laminin 0.002
Family EGF-type module 0.08
Further Details:      
 
Domain Number - Region: 598-621
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00282
Family EGF-type module 0.052
Further Details:      
 
Domain Number - Region: 381-404
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00406
Family EGF-type module 0.038
Further Details:      
 
Domain Number - Region: 287-311
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00509
Family EGF-type module 0.027
Further Details:      
 
Domain Number - Region: 258-281
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00586
Family EGF-type module 0.056
Further Details:      
 
Domain Number - Region: 225-249
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00838
Family EGF-type module 0.026
Further Details:      
 
Domain Number - Region: 194-217
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0103
Family EGF-type module 0.075
Further Details:      
 
Domain Number - Region: 319-342
Classification Level Classification E-value
Superfamily EGF/Laminin 0.011
Family EGF-type module 0.037
Further Details:      
 
Domain Number - Region: 348-373
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0122
Family EGF-type module 0.033
Further Details:      
 
Domain Number - Region: 443-466
Classification Level Classification E-value
Superfamily EGF/Laminin 0.02
Family EGF-type module 0.056
Further Details:      
 
Domain Number - Region: 567-590
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0445
Family EGF-type module 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSNLEP00000020496   Gene: ENSNLEG00000016850   Transcript: ENSNLET00000021516
Sequence length 2201
Comment pep:known_by_projection supercontig:Nleu1.0:GL397294.1:8876018:8972831:-1 gene:ENSNLEG00000016850 transcript:ENSNLET00000021516 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MGAMTQLLAGVFLAFLALTTEGGVLKKVIRHKRQSGVNATLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLAPPSEPSESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTRPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCIDGQCICDEGFTGEDCSQLACPRDCNDQGKCVNGVCICFE
GYAGADCSREICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCINGTCYCEEGFTGEDCGKLTCPHACHDQGRCEEGQ
CVCDEGFAGVDCSEKRCPADCHNHGRCVDGQCECDDGFTGADCGELKCPNGCSGRGRCVN
GQCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRC
VNGMCVCDDGYTGEDCRDRQCPRDCSNRGRCVDGQCVCEDGFTGPDCAELSCPNDCHGRG
RCVNGQCVCHEGFMGKDCKEQRCPSDCHGQGHCVDGQCICHEGFTGLDCGQRSCPNDCSN
LGQCVSGRCICNEGYTGEDCSEVSPPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTH
EGGLEMQFRVPGDQTSTIIRELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQVEVKDVTDTTALITWFKPLAEIDGIELTYGIK
DVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLDAPRNLR
RVSQTDNSITLEWRNGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKEDKESNPATINAATELDTPKALHVSETAETSLTLLWKTPLAKFDRYRLNYS
LPTGQWVGVQLPRNTTSYVLRGLEPGQEYSVLLTAEKGRHKSKPAHVKASTEQAPELENL
TVTEAGWDGLRLNWTAADQAYEHFVIQVQEANKVEAAQNLTVPGSLRAVDIPGLKAATPY
TVSIYGVIQGYRTPVLSAEASTGETPNLGEVVVAEVGWDALKLNWTAPEGAYEYFFIQVQ
EADTVEAAQNLTVPGTLRSTDLPGLKAATHYTITIRGVTQDFSTTPLSVEVLTEEVPDMG
NLTVTEVSWDALRLNWTTPDGTYDQFTIQVQEAEQVEEAHNLTVPGSLRSVEISGLRAGT
PYTITLHSEVRGHSTRPLAVEVTTEELPQLGDLALSQVGWDGLRLNWTAADNAYEHFVIQ
VQEVNKVEAAQNLTVHGSLRAMDIPGLEAATPYRVSIYGVIRGYRTPVLSAEASTAKEPE
IGNLNVSDITPESFNLSWTATDGIFEIFTIEIIDSNRLLETVEYNISGAERTAHISGLPP
STDFIVYLSGLAPSIRTKTISATATTEALPLLENLTISDINPYGFTVSWMASENAFDSFL
VTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIVTEAE
PEVDNLLVSDATPDGFRLSWTADEGVFDDFVLKIRDTKKQSEPLEITLLAPERTRDITGL
REATEYEIELYGISKGRRSQPVSTIATTAMGSPKEVIFSDITENSATVSWRAPTAQVESF
RITYVPITGGIPSMVTVDGTKTQTRLVKLIPGVEYLVNIIAMKGFEESEPVSGSFTTALD
GPSGLVTSNITDSEALARWQPAIATVDSYVISYTGEKVPEITRTVSGNTVEYALTDLEPV
TEYTLRIFAEKGPQKSSTITAKFTTDLDSPRDLTATEVQSETALLTWRPPRASVTGYLLV
YESVDGTVKEVIVGPDTTSYSLADLSPSTHYTAKIQALNGPLRSNMIQTIFTTIGLLYPF
PKDCSQAMLNGDTTSGLYTIYLNGDKAQALEVFCDMTSDGGGWIVFLRRKNGRENFYQNW
KAYAAGFGDRREEFWLGNASLNKITAQGQYELRVDLRDHGETAFAVYDKFSVGDAKTRYK
LKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYRNCHRVNLMGRYGD
NNHSQGVNWFHWKGHEHSIQFAEMKLRPSNFRNLEGRRKRA
Download sequence
Identical sequences XP_012364578.1.23891 ENSNLEP00000020496 ENSNLEP00000020496

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.