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Domain assignment for gi|374309199|ref|YP_005055629.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374309199|ref|YP_005055629.1|
Domain Number 1 Region: 23-91
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 0.00000000000263
Family Sigma2 domain of RNA polymerase sigma factors 0.0069
Further Details:      
 
Domain Number 2 Region: 191-280
Classification Level Classification E-value
Superfamily NTF2-like 0.00000000000786
Family Ketosteroid isomerase-like 0.062
Further Details:      
 
Domain Number 3 Region: 128-182
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.00000000206
Family Sigma4 domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|374309199|ref|YP_005055629.1|
Sequence length 315
Comment ECF subfamily RNA polymerase sigma-24 subunit [Granulicella mallensis MP5ACTX8]
Sequence
MTIAMAEEPISETPLSVRRGLEDGEHDDGLLVFAEVRPRLFGIAYRMLGSAAEAEDIVQD
VWLRWQATDRNIVESPSAFLATTTTRMCINFSQSAHSRRETYVGPWLPEPVDTSSDPALG
AERGEALGLAILLLLEKLSPTERASYVLREAFDYSYRQIADIIQMEEANTRQLVSRARKH
IADGRRTPVSSEEQRRLLEAFIGAAQKGDLATLEGLFVEDVVSYSDGGGIVRTAARAPVS
GRDHVAKFITSFASHFWTGITLRWIETNGQASVLLSRDGIPVALATVDASVEGIHQIMWI
LRPSKLAAISQTGRL
Download sequence
Identical sequences G8NZX2
WP_014263483.1.98070 gi|374309199|ref|YP_005055629.1|

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