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Domain assignment for gi|374309229|ref|YP_005055659.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374309229|ref|YP_005055659.1|
Domain Number 1 Region: 184-265
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.000000829
Family Sigma4 domain 0.044
Further Details:      
 
Domain Number 2 Region: 85-195
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 0.00000286
Family Sigma2 domain of RNA polymerase sigma factors 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|374309229|ref|YP_005055659.1|
Sequence length 323
Comment sigma-70 family RNA polymerase sigma factor [Granulicella mallensis MP5ACTX8]
Sequence
MDSASAQPVELGPPATAEGAAEPQISATLIDALWREAEADSLELGRTELAQKLLTVGAKY
NYGLPQGASATPTQIEAFYRSLQLRELALAHACALGRDAAWQQFLQRFRAPLTQAAVAMT
GSSSLGQDLADSLYSELFGLNERDGQRRSPLASYSGRGSLMGWLRTTLAQRHVDHHRRTR
REAPLEDTDFAAAPTAPTPTSEMLARLGSSLAEALRALAPEDRFLLSAYFLDQRTLLQIA
QLLRVHEATVSRKLKRLTSGLHQQLLKRLQASGMSRRAAEEALGTDPRDLTINLRNLLQT
SVAPTFSNQTEGDKTKPSGKQQT
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Identical sequences G8P0M1
gi|374309229|ref|YP_005055659.1| WP_014263513.1.98070

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