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Domain assignment for gi|374309266|ref|YP_005055696.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374309266|ref|YP_005055696.1|
Domain Number 1 Region: 13-112
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 6.47e-25
Family Sigma2 domain of RNA polymerase sigma factors 0.00029
Further Details:      
 
Domain Number 2 Region: 136-199
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 1.59e-17
Family Sigma4 domain 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|374309266|ref|YP_005055696.1|
Sequence length 231
Comment ECF subfamily RNA polymerase sigma-24 subunit [Granulicella mallensis MP5ACTX8]
Sequence
MSDLASAIGIRAEEQSLVAELQAGSEQAFALLIAQYSHPVYSLIARSLRDPADAADVTQE
VFVKVFRSISGFHGEASLRTWIYRIALHEASNQRRWWGRHKRQELTIDAPLENEEGETFC
LADALATGDASPYECVARSETRTHVEAALRTIPEAFREVVVLREIEGFGYEEIAEILNVN
LGTVKSRLTRGRAALREALLKDAATRPQGQQAHPSRNRDVAKVGHPEVGTL
Download sequence
Identical sequences G8P0Q8
WP_014263550.1.98070 gi|374309266|ref|YP_005055696.1|

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