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Domain assignment for gi|374309563|ref|YP_005055993.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374309563|ref|YP_005055993.1|
Domain Number 1 Region: 79-180
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 4.06e-26
Family Sigma2 domain of RNA polymerase sigma factors 0.0028
Further Details:      
 
Domain Number 2 Region: 204-267
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 5.23e-17
Family Sigma4 domain 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|374309563|ref|YP_005055993.1|
Sequence length 274
Comment ECF subfamily RNA polymerase sigma-24 subunit [Granulicella mallensis MP5ACTX8]
Sequence
MATATIPAIFEQDSRVLLGARILRREPLTPPSGRDSRPERLPLQEIPMTEARLSPQDPDP
QREPLPQVQEQRAAAAAEQARLAELAVRCLQGDADAWEKLATGQHRRIYGICYRFTGSAT
EAEDMTQEVFLKMFKNLASFDPAKGGFTTWLTTLTRNLLVDSYRRSRMDRVSDSLDETYD
GEDDGPSKAEKLADTRPGQEHHMAGLELRAQIQQALAQVSPDLREAVILRDLEDMDYKEI
AEILGVPQGTVKSRISRGRSELAKLLKRIEGQVM
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Identical sequences G8NQA7
gi|374309563|ref|YP_005055993.1| WP_014263847.1.98070

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