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Domain assignment for gi|374312965|ref|YP_005059395.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374312965|ref|YP_005059395.1|
Domain Number 1 Region: 14-78
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 0.00000000122
Family Sigma2 domain of RNA polymerase sigma factors 0.005
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|374312965|ref|YP_005059395.1|
Sequence length 951
Comment ECF subfamily RNA polymerase sigma-24 subunit [Granulicella mallensis MP5ACTX8]
Sequence
MPFSHSNPVRRTNEDVFFDYYPRLLEWAAQITHNDRSEAEDLVQDFYLRITRITRPIDEM
EQPEGYLFRVLRNLYLVRVRQSGRNPLNNLSIVDYDSIEHGLAVADRGELLFVHDHLRKI
CRYACERKSTVRSASVLILRFFHGYYPSEVMRILQAGRSSVDMLLQTARNEARLSLERPE
AIRCIVPSGNLPLFFSKKGDSTHLLFHELQEAVFSAVEGRCLERAVLERRYGALNGSAKL
TAQELSHLVSCRSCLERVNKILDLPSLAERSPEDGIDRDSMSGPGGVSGSRGPSARKKLT
RNSPTLRKMERRARELFEHRPSSLEIVVDGEVRSSQRVTAEVNELRLRLANKEEPSLIEV
QSEQLYCLACLPLESPDRSDRMKQVETISLSDRRSLILTVTFGPDDLIVHVLYLDPVMAE
MPETDIAFESANAPALFETGSVSNGGFIPIVRHSERQFRRWTSSFSVWLQRQYRRLFIGN
MNPFLASAVFLTLGACVCLWLWHKSTPPMSANLFLQRAETADQIAVSTGESKVIAQKVRI
RTASQTIERVIHRDTSGRRKPKLQPLDRQTTMLQARLAKAGVNWDAPLSAAAYQDWYKHS
RVTRDSVQTAGSTLLMLTTTIDSGDVTKESLTVRAADFHPVERTISFRDTGNVEIAELDY
NVMPWSAADPSWFEPVVTTAASDLPAMHAAIHLPRGLADSELDEAELGARTVLNQLQADA
GEPISLARTAEGMEVKGVVDTNARKRELLSRLALIPNVHASILSAEEIGPRPLPSAVSGD
GQPRSPIQEQPSPLEQYLRKKNLSMDQLVPASDNLLDGSLRIVQAGVHLSELQSRFREVN
PLPVNEQTQLETLSRNYRGTITAGIYANQQILLSLGFASSSPVPEISEPDRSGRGIDEQL
RRYRQLCLEMVSNETGLTRSAPEIAREILDVGERIRLHLADTSTAFRKDNN
Download sequence
Identical sequences G8NQ31
WP_014267236.1.98070 gi|374312965|ref|YP_005059395.1|

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