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Domain assignment for gi|374313103|ref|YP_005059533.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374313103|ref|YP_005059533.1|
Domain Number 1 Region: 89-192
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 5.49e-26
Family Sigma2 domain of RNA polymerase sigma factors 0.0007
Further Details:      
 
Domain Number 2 Region: 208-276
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000000000000185
Family Sigma4 domain 0.0085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|374313103|ref|YP_005059533.1|
Sequence length 279
Comment ECF subfamily RNA polymerase sigma-24 subunit [Granulicella mallensis MP5ACTX8]
Sequence
MKSSRTPVTPPSEPRAEVDDPQFPAESDDLPQPEAEDGVSEDMGTLAIHPGLLNTPQDVH
LPADRPLGAEALTPEQARIRAEAIARGDFSQLSDAEVMLELRSGNLAAFDILLAKYRKPI
IHFMFRMVHNQAVAEELAQEVFLRIYRSRETYRAEARFSTWLYRIATNLGVNHARDTRHE
RSASTIYLDETDAETGTTPDVADSTPSAEANMLRRERMNAIRQHVLALPERQQHAVLMHK
YEGMDYKQIGEVLKLSESATKSLLFRAYQTLREKLKDFV
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Identical sequences G8NRR2
gi|374313103|ref|YP_005059533.1| WP_014267374.1.98070

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