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Domain assignment for gi|374311118|ref|YP_005057548.1| from Granulicella mallensis MP5ACTX8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|374311118|ref|YP_005057548.1|
Domain Number 1 Region: 134-193
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000000579
Family Sigma4 domain 0.052
Further Details:      
 
Weak hits

Sequence:  gi|374311118|ref|YP_005057548.1|
Domain Number - Region: 16-109
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 0.011
Family Sigma2 domain of RNA polymerase sigma factors 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|374311118|ref|YP_005057548.1|
Sequence length 204
Comment RNA polymerase sigma factor [Granulicella mallensis MP5ACTX8]
Sequence
MSKGAPLSAALEGRGDVTSLLALWSRGDDSALEQLTPIIYDDLLRLAKAKLRREYGDCTL
EPTGLVHEAYLRLAGQSKVHAESRIHFYAIAANTMRRVLIEHARNHNAQKRGGGMRITLQ
TGMDIAQERPPDFIMLDEALGRLAQIDKRKSQTIELKYFGGLSTEEIGLHLGISVATVGR
ELRLGQAWIRREMSGALIDNKDEK
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Identical sequences G8NVD7
WP_014265396.1.98070 gi|374311118|ref|YP_005057548.1|

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